| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2653 |
|---|
| Symbol | |
|---|
| ID | 9246504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 3161046 |
|---|
| End bp | 3161873 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003680576 |
|---|
| Protein GI | 297561602 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.015626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.494788 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAC TGGAGGCGAA CGGCATCACG TGGTCGGTCG ACAGGACACG CATCCTCGAC
GGGGTCTCGA TCCGGGCGCG CTCCAACGGG GTGCTCGCCG TGCTCGGGCC CAACGGGGCG
GGCAAGACCT CACTGCTGCG CATCCTGGCG GGGCTCCGGC GTCCAGACGC CGGAACGGTG
CTCCTGGGCG GGGAACCGGT CCGCTCCCTG CCCCGGCGCG CGGTCGCCCG GCGGGTGGCC
ATCGTGGAAC AGTCACCCGA GGTGCACACC GACATCACCG TCGACGACGC CGTGGCGCTC
GGCAGGACGC CCTACCGCGG CACCTTCGCC GGGCTGGACG GCGAGGACCG TGCCGCGATC
GAACAGGCGC TCGCCCTCAC CGGGATGCGC GCCTACCGGT CGCGGTCGTG GCGGACGCTC
TCCGGCGGTG AGCGACAGCG CGCCCAGCTG GCCCGCGCGC TCGCGCAGCA ACCGGAGGTG
ATCGTGCTGG ACGAGCCGAC CAACCACCTC GACATCCGCT ACCAGCTCGA CGTCCTCACC
CTGCTGCGAT CGCTCGACAT GACGGTGGTG ACCGCCCTGC ACGACCTCAA CCTGGCCGCA
CGCTACTGCG ACCGGGTCGC TGTCCTGCAC GCCGGGCGGA TCGCGGCGAC GGGCACGCCC
GCCGCCGTGC TGACACCCGA GCTCGTCCGT TCCGTCTACG GGGTCGAAGC CGTCGTCGAC
ACCTCCCCGC ACACGGGAGC GCCGGTCGTG ACCTACCTGG GCGGCGTGTC CGGACGCTCG
ACACCGGTGC CCGATCCCGG GCCGCACCGC CGGCGGCAGA CGGAGTGA
|
|---|
| Protein sequence | MTALEANGIT WSVDRTRILD GVSIRARSNG VLAVLGPNGA GKTSLLRILA GLRRPDAGTV
LLGGEPVRSL PRRAVARRVA IVEQSPEVHT DITVDDAVAL GRTPYRGTFA GLDGEDRAAI
EQALALTGMR AYRSRSWRTL SGGERQRAQL ARALAQQPEV IVLDEPTNHL DIRYQLDVLT
LLRSLDMTVV TALHDLNLAA RYCDRVAVLH AGRIAATGTP AAVLTPELVR SVYGVEAVVD
TSPHTGAPVV TYLGGVSGRS TPVPDPGPHR RRQTE
|
|---|
| |