Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2646 |
Symbol | |
ID | 9246497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3155303 |
End bp | 3155995 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | protein of unknown function DUF1028 |
Protein accession | YP_003680569 |
Protein GI | 297561595 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.475903 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTACGCAG GCACCTTCTC CATCGTCGCC CACGACGTCG CCACCGGAAC GTGCGGTGTC GCGGTCAGCA GCCGCTTCCC GGCGATCGGC GCGCTGTCGG TGTTCGCGCA CGCGGAGGCG GGGGCGGTCG CCACACAGGC GCTGATCAAC CCGCTGCTGG GCGCTGACGC CCTGGAGCTG CTGCGGTCCC ACTCCGCCGA GGAGGCGCTG CGCCGGGTCC TGGACGCCGA CCCCGACGCC GACTCGCGAC AGGTCGCCGT GGTCGACCGG GAGGGACGCG CCGCCGCGCA CACCGGCGCG CAGGCGCACC CGTGGTGCGG CCACAGGGTG GGGGACGGGT ACGCGGTGGC GGGCAACATC CTGACCGGCG CCGACACGCT CGACGCGATG GCCGAGCGGT TCGAGGCCGG CGCCGGGGAG CGGATGGACC GGCGGCTGCT GGGCGCCCTG GAGGCGGGGC AGGCGGCCGG CGGCGACCGG CGCGGCAGAC AGAGCGCCGC GCTGTACGTG CATACCGGCC ACCCCTACCC CCACCTGGAC CTGAGGGTGG ACGAGCACCC CGACCCGGTG GCCGAGCTGC GCCGGATCCA CGGGGTCGCC GAGCGGGAGC TGCTGCCGTT CGTGGAGGCC ATGCCCACGC GCGCGCACCC CGCGGGCCGC TTCGAACGCC TGCTGGACAC CGGCGACCGC TGA
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Protein sequence | MYAGTFSIVA HDVATGTCGV AVSSRFPAIG ALSVFAHAEA GAVATQALIN PLLGADALEL LRSHSAEEAL RRVLDADPDA DSRQVAVVDR EGRAAAHTGA QAHPWCGHRV GDGYAVAGNI LTGADTLDAM AERFEAGAGE RMDRRLLGAL EAGQAAGGDR RGRQSAALYV HTGHPYPHLD LRVDEHPDPV AELRRIHGVA ERELLPFVEA MPTRAHPAGR FERLLDTGDR
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