Gene Ndas_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2618 
Symbol 
ID9246469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3122357 
End bp3122956 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content76% 
IMG OID 
Productisopentenyl-diphosphate delta-isomerase, type 1 
Protein accessionYP_003680541 
Protein GI297561567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0277117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0125903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GAACGGACAC CGACCACCGC TCCGCCGCCG ACCAGTACGA CCCCGCCGCG 
CGGCCGGTCA TGCTCGAACT GGTCGACGAG GACGGGGCGA CGATCGGCAC CGCGGAGAAG
CTCTCCGCCC ACCTGCCCCC CGGGCGGCTG CACCGGGCCT TCTCGGTCTT CCTGCTGGAC
GGGCGGGGCC GCCTGCTGCT CCAGCGCCGT GCCCTGGGCA AGTACCACTC CCCGGGCGTG
TGGTCCAACA CCTGCTGCGG CCACCCCTAC CCCGGCGAGA CGCCCTTCGC GGCCGCCGCC
CGGCGCACCG GCGAGGAGCT GGGCGCGGCC CCCGTGCTGA TGCGCGAGGC CGGGACCGTG
CGCTACAACC ACCCCGACCC GGTCTCCGGG CTGGTGGAGC AGGAGTACAA CCACCTCTTC
GTCGGCCTGG TGCGCGACGA CCTGCGCCCC GACCCCGGGG AGATCGCCGG GACCGCGTTC
GTGGACCCGG ACGGGCTCGC GCGGCTGCGC GGGGAGCACC CGGTCTCGGC GTGGTTCGCG
ACCGTGTTCG ACGCCGCGCT GCCCGCGGTG CGCGAGCTGG CGCCCGACGC GGGCTGGTAG
 
Protein sequence
MTARTDTDHR SAADQYDPAA RPVMLELVDE DGATIGTAEK LSAHLPPGRL HRAFSVFLLD 
GRGRLLLQRR ALGKYHSPGV WSNTCCGHPY PGETPFAAAA RRTGEELGAA PVLMREAGTV
RYNHPDPVSG LVEQEYNHLF VGLVRDDLRP DPGEIAGTAF VDPDGLARLR GEHPVSAWFA
TVFDAALPAV RELAPDAGW