Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2581 |
Symbol | |
ID | 9246432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3073998 |
End bp | 3074813 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003680505 |
Protein GI | 297561531 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.012514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGTTG AACGGAACCC CTCGGATGTC CGGTTTGGTC ATGCCCTCAT GCGTGCTCGT AAGCGGGCAG GCGTCCAACA GGACGGCCTT GCACGCCATC TCAACTGCAC ACCCGGACAT ATCTCCCATA TAGAGAACGG CCGCCGAAAG CTGAACGAAT CGAAGGTCGT TGACCTGGAC GAGTTCCTAG GGGCCAAGGG GCGGCTGGTC CGTACCTATG AGGAGGTCTA CCAACCGGAG CACGTCGACT GGATCGGTGA GTTCCGGCAG ATGCAAGCTG AAGCGGAGGT GATCCGTGAA TATCAGAACA GCTTGGTTCC TGGTACGATC CAGCATCCCG AGTACGCGGC GGCCACCATT GCCGCAGGCT CTCCGTGGCT GTCACCTGCC GAGGCAGAGG AACGGCTTCG CGAGCGAATG GACTGGGGGA AAGAAGTTCT CCGTCCAGGC GGGCCGCAAT ACCACGCTGT GCTCGATGAC ATCACGGTAG TTCGGGCGAT TGGTCCTAGT CAGATGATGG TCAATCAGAT TGACCGGATT ATCGAACTGG CTGAAAGCGG ACGAATCATG GTCCAGCTGC ACGGCTGGGA CCAGTACCCA CACGCCGGAC TTGATGGTCC GTTCTCGCTG CTAACGTCCT CGGCAGCACC TGAGCTTGTG CACGTGGAGT CGGTCTACCG TGGCCAGAAC ACGGATGACC TGAGGGACGT GCACCGGTTC GGGATGCTGT TCAGTAGATT ACAGGCGACC GCGAGGTCGC CGCTGGAGTC CGTGAAGTTC CTCAAGGAGA TGAGGGAAAG ATATGGCCAA CCGTAA
|
Protein sequence | MEVERNPSDV RFGHALMRAR KRAGVQQDGL ARHLNCTPGH ISHIENGRRK LNESKVVDLD EFLGAKGRLV RTYEEVYQPE HVDWIGEFRQ MQAEAEVIRE YQNSLVPGTI QHPEYAAATI AAGSPWLSPA EAEERLRERM DWGKEVLRPG GPQYHAVLDD ITVVRAIGPS QMMVNQIDRI IELAESGRIM VQLHGWDQYP HAGLDGPFSL LTSSAAPELV HVESVYRGQN TDDLRDVHRF GMLFSRLQAT ARSPLESVKF LKEMRERYGQ P
|
| |