| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2574 |
|---|
| Symbol | |
|---|
| ID | 9246425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 3068465 |
|---|
| End bp | 3069076 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003680499 |
|---|
| Protein GI | 297561525 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0758263 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAGGA ACTACGCCGG ACTCAGCCGC GAGCGCATCA TCCTCGAAGC GCTCCACATC
ATCGCTGGCC GCGGACTCGG CGGCCTGTCC ATGCGCCGCC TGGGCGACGC GCTGGAGGTG
GAGGCCATGG CCATCTACCA CCACTTCCCC CTGGGCAAGG AGCAGTTGTT CAACGCCATC
GCCGCCTACG TCACCTCCCC CGCGGCCACC GGCACCGTCC CCCTCGACGA CGGGGAGGCG
TCGGAAGACG CGGAGGGGGC GAAGGAGCCC GAGGAGGACA CCCGGCCCTG GGACGTGCGC
CTCACCGAGT GGGCCGAGGC CTACCGGGAG CGGCTGCTGG AGTTCTCCGG GGCGCTCTCC
CTGCTGGTCC ACCGCGCCCC GCGCACGCCC AGCAGCGACG CCACCCGGGC CCTGGTCCAC
GACGCCCTCA CCGAGGCGGG GTTGGAGGAC GAGGACCTGG AGCGCGCCGC CGACGCCCTG
CACTCCTACT GCGTGGGCGC GGTCGTGCAC CAGGTCCGCC ACCAGGACGA GGAGGACGCC
CCCGACGCCG CCGAGTCCCG GGCGCGCTTC CACCACGGGC TGCGCGCCCT GCTGCGCGGG
CTCACCGCCT GA
|
|---|
| Protein sequence | MSRNYAGLSR ERIILEALHI IAGRGLGGLS MRRLGDALEV EAMAIYHHFP LGKEQLFNAI
AAYVTSPAAT GTVPLDDGEA SEDAEGAKEP EEDTRPWDVR LTEWAEAYRE RLLEFSGALS
LLVHRAPRTP SSDATRALVH DALTEAGLED EDLERAADAL HSYCVGAVVH QVRHQDEEDA
PDAAESRARF HHGLRALLRG LTA
|
|---|
| |