| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2569 |
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| Symbol | |
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| ID | 9246420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 3064116 |
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| End bp | 3065522 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003680494 |
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| Protein GI | 297561520 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.152283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCA CTGCCCCAGC CGCTCCGGCA CCCACCGCCG GAGCCCCCGC TGACACCGCT
CGCAGCGACG ACGCGTCCGC CGACGCGGTC CTGACCGACC TGCTCGACCG CGGACGCGCC
CAGGGGCACC TGTCCCTCTC CGAACTGCGT GCCGCTTTCA CCGCGGCCGC CGTCTCCACC
GGCGACGGCC GTTCCATCCT GCGTGAACTC ACCGAGAACG GGGTCAGGCT CGCCAACGGG
GGCGACGACT CCGCACCGGT GGCCGATCCC GACGCCGAGG ACGACGTGCT GGAAGACACT
CTCATCGCCA CGGTGCCCGA CACCGACGAG GCACCCAGGG CCGAAGGCAA GACCGCGCCG
CGCAAGGGCC CCTCCCCCCG GAGGAAGACC CGCTCCACAC GGCGCGTCAA GAAGGCCGAG
CCCGCCCAGA CCACCACCGA CGCGGAGACC GGCGAGGCCG ACCTCGACGA CCAGTCCCCC
GCCATGGGCG ACTCGGTCCA CACCTACCTC AAGGCCATCG GCCGACGCCA GCTCCTCACC
GCGGAGCAGG AGGTCGACCT GGCCAAGCGG GTCGAGGCCG GGCTCTACGC CGAGTACCGG
CTCGGCCTGC ACGGCGAGGT GGACGGCTCC GCCCCGCTGG CCGAGGCCGA GGTCGAGGAG
CTGGAGTGGG TGGCCGAGGA CGGCCGCAAG GCCAAGTCCC ACATGCTGGA GGCCAACCTG
CGCCTGGTGG TGTCGGTGGC CAAGAAGTAC AGCGACCGGG GGATGTCGCT GCTCGACGTG
GTCCAGGAGG GCAACCTCGG CCTGATCCGC GCCGTGGAGA AGTTCGACTA CACCAAGGGC
TTCAAGTTCT CCACCTACGC CATGTGGTGG ATCCGCCAGG CCATCCAGCG CGGTTTCGCC
GACTCCGCGC GCACCATCCG CCTGCCCGTG CACGTCCTGG AGCTGCTGAG CAAGGTCAGC
CGCCTGGAGC GCGACATGCA CCAGGCGCTG GGCCGCGAGC CCACGCCGGA GGAGCTGGGC
CTGGAGCTGG ACAAGACCCC GGCCCAGATC GAGGAGCTGC TGCGGGTCAC CCGCCAGCCC
ATCAGCCTGG ACTCCACGAT CGGCGAGGAC GGCGAGACCC GCATCGGCGA CCTGATCGAG
GACGTGGACG CCTCGGAGGC CTCCGAGGTG GTGGACCGCC AGCTCATGGC CGACCAGCTG
CGCAACGCGC TGTCGGACCT GGAGCCGCGC GAGGCCACCA TCATGTCCCT GCGCTTCGGC
CTCATGGACG GCCGTCCGCG CACCCTGGAC GAGATCGGCA AGCACCTGGG GCTGACCCGC
GAGCGCATCC GCCAGCTGGA GAAGCAGTCG CTGTCCAAGC TGCGCCACCC CAGCCGCGCC
CAGCAGCTGC TGGACTTCGC CAGCTAG
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| Protein sequence | MTSTAPAAPA PTAGAPADTA RSDDASADAV LTDLLDRGRA QGHLSLSELR AAFTAAAVST
GDGRSILREL TENGVRLANG GDDSAPVADP DAEDDVLEDT LIATVPDTDE APRAEGKTAP
RKGPSPRRKT RSTRRVKKAE PAQTTTDAET GEADLDDQSP AMGDSVHTYL KAIGRRQLLT
AEQEVDLAKR VEAGLYAEYR LGLHGEVDGS APLAEAEVEE LEWVAEDGRK AKSHMLEANL
RLVVSVAKKY SDRGMSLLDV VQEGNLGLIR AVEKFDYTKG FKFSTYAMWW IRQAIQRGFA
DSARTIRLPV HVLELLSKVS RLERDMHQAL GREPTPEELG LELDKTPAQI EELLRVTRQP
ISLDSTIGED GETRIGDLIE DVDASEASEV VDRQLMADQL RNALSDLEPR EATIMSLRFG
LMDGRPRTLD EIGKHLGLTR ERIRQLEKQS LSKLRHPSRA QQLLDFAS
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