| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2566 |
|---|
| Symbol | |
|---|
| ID | 9246417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 3060162 |
|---|
| End bp | 3061145 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_003680491 |
|---|
| Protein GI | 297561517 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.903324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0772573 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCTG CCGAACCCGA CCCGGCGGGC ACGCCCGCCG GGGGACGCGC CTTCGCGGTC
GGCCTGCGCA ACCGCTTCCG CGGCATCACC GTCCGCGAGG GCATGCTCGT GCGCGGGCCC
GCCGGATGGG GGGAGTTCTC CCCCTTCGCC GAGTACGGCC CGCGCGAGTG CGCCCGCTGG
TGGGCCGCCT GTGAGGAGGC CGCCCACCAC GGCTGGCCCG CGCCCGTCCG CGACCGCGTG
CCGGTCAACG TGACCGTGCC CGCCGTGGAC CCCGAGCGGG CCCACGCGAT CGTCGCCGCG
GGCGGCTGCG CCACCGCCAA GGTCAAGGTG GCCGAACGCG GCCAGGACCC CGCCGAGGAC
CTGGCCCGCG TCGAGGCGGT CCGCGACGCC CTGGGCCCCT CGGGGCTGGT GCGGGTGGAC
GCCAACGGCG CCTGGGACGT CGACACCGCC GTGCGGATGG TGCGCGAACT GGACCGCTTC
GGCCTGGAGT ACGTCGAGCA GCCGTGCGCC ACCCTGGACG AGCTGGCCGC CGTGCGCCGC
CGGGTGTCGG TCCCCGTGGC CGCCGACGAG TCCGTCCGCA GGGCCGAGGA CCCGCTGCGG
GTGCGCGCCG CCGGCGCCGC CGACATCGTG GTCCTCAAGG TGCAGCCGCT GGGCGGGGTG
CGCGCCGCGC TGCGCGTGGC CGAGGCGTGC GGGCTGCCGG TGGTGGTCTC CAGCGCCGTG
GAGACCTCGG TGGGCCTGGC GGCGGGGGTG GCCCTGGCGG CCGCGCTGCC GGAGCTGCCC
CACGCGTGCG GCCTGGCCAC CATGCAGATG CTGACCGCCG ACGTCACCGC CGACCCCCTG
CTGCCCGAGA ACGGGTTCCT ACCCGTGCGC CCGGTGACGG TGGACGAGGC GAGCCTGCGC
GCGGTGGAGG TCGACCCCGC CGCCTGGCGG GCCCGCGCCG AGGCCGCGCG GTCGGCCGCC
GACGAGGTCC CCGGCGCCGG ATGA
|
|---|
| Protein sequence | MTAAEPDPAG TPAGGRAFAV GLRNRFRGIT VREGMLVRGP AGWGEFSPFA EYGPRECARW
WAACEEAAHH GWPAPVRDRV PVNVTVPAVD PERAHAIVAA GGCATAKVKV AERGQDPAED
LARVEAVRDA LGPSGLVRVD ANGAWDVDTA VRMVRELDRF GLEYVEQPCA TLDELAAVRR
RVSVPVAADE SVRRAEDPLR VRAAGAADIV VLKVQPLGGV RAALRVAEAC GLPVVVSSAV
ETSVGLAAGV ALAAALPELP HACGLATMQM LTADVTADPL LPENGFLPVR PVTVDEASLR
AVEVDPAAWR ARAEAARSAA DEVPGAG
|
|---|
| |