Gene Ndas_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2543 
Symbol 
ID9246394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3032096 
End bp3033022 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content75% 
IMG OID 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003680468 
Protein GI297561494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.159987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.409771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCA TCGGCATGTT CACCCTGCAC ACCGGCAGCG CGCTGGCCGT CACGGCCTTC 
GCCCAGGCCA GCCCCGCCAC CGTCACCTGG CTCCGGCTGA GCTGGGCCGC GCTCCTGCTG
CTGGCCCTGG GCGGCCGCTC CCTGTGGCGG GCGGTGCGCG CGGCGTCGCG GCGCGAACTG
GGCGCCGTGG TGATCCTGGG CACAGCGAGC GCGGGGATGA TGCTGTTCTA CTCCGAGGCC
ACGGCGCGGA TCGAACTCGG CACCGCCACC TCCATCGAGT TCCTCGGCAC CCTCGTGGTG
GCCGTGGCCG CCATGCGCCG CCGCCGCGAA CTCGTGTGGA TCCTCGCCGC GGTCGCGGGC
GTGCTCTGCC TGACCCGCCC CTGGCAGGGC GAACTCGACC TGGTCGGGGT CGGCTTCGCC
CTGGCCGGCG CGGTCTGCGT GGTGGGCTAC ATCGTGCTGA CCCAGCGGGT GGGCGCCGGG
TTCGGCGCCG TGCACGGCCT GGCCCTGACC ATGACCGTGG GCGCGGTGGT CAGCGCGCCG
CTGGGCGCCC CCGGCCTGGT CGCCGCCCCC GACCCGGACC TGGTGCTGTT CACCCTGCTC
ATCGCGCTGC TGTTCCCCAT GGTGCCGTTC CTGCTGGAGA TGGTGGCCCT CCAGCGGATG
AGCCGCACCG CCTACAGCAC CTTCTCCAGT CTGGAACCGG CGGTCGCCCT GGTGATGGGC
CTGGTGGTCA TCGGCCAGGC GCCCGCCCTG GTCCAGGTCG TCGGCATGGT GCTGGTGGTG
GTCGCGGGAG CCGGCGCGGC CCGGGGCGAC GGCTCCCGCC GCCCCGCCGT GCCCGACCTG
GCGGCGGCCA CCGCCGCCGA CCCGCACCGG CCCGAGGAGG GAGCACGGCC GGAGGAGATC
GGCGCGGCGT CGGGCCGGGC GGTCTGA
 
Protein sequence
MLLIGMFTLH TGSALAVTAF AQASPATVTW LRLSWAALLL LALGGRSLWR AVRAASRREL 
GAVVILGTAS AGMMLFYSEA TARIELGTAT SIEFLGTLVV AVAAMRRRRE LVWILAAVAG
VLCLTRPWQG ELDLVGVGFA LAGAVCVVGY IVLTQRVGAG FGAVHGLALT MTVGAVVSAP
LGAPGLVAAP DPDLVLFTLL IALLFPMVPF LLEMVALQRM SRTAYSTFSS LEPAVALVMG
LVVIGQAPAL VQVVGMVLVV VAGAGAARGD GSRRPAVPDL AAATAADPHR PEEGARPEEI
GAASGRAV