| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2509 |
|---|
| Symbol | |
|---|
| ID | 9246359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 2974374 |
|---|
| End bp | 2975270 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | 3-hydroxyisobutyrate dehydrogenase |
|---|
| Protein accession | YP_003680434 |
|---|
| Protein GI | 297561460 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.41128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0242811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCA CACCAGTTCC ACAGCCATGC CCGAAAACGG CCGTGATGTT CGTCGGCGTC
GGCGCCATCG GCCTGCCCAT GGCCCTGCAG GTCGCCGCGG CCGGGCACAC CGTGGTCGGC
GTGGACCCCT CGCCGCGGCG CCGCGAGGAG GCCCGGAACC AGGGCCTGCG CGCCCAGCCC
GACACCGCGG GGATCGGTGA GGCCGACGTC GTCATCGTCA TGGTCGCCAC CCCCGACCAG
CTGCGCGCGG CCGTCACCGC CCCGGGCGGC GCCCTGGAGG CCATGCGCGC CGACGCGGTG
CTCGTGGTCA TGAGCACCGT CGGACCCGGC CCCGTGCGCG AGGTCGCCGA CCGCGCCCGC
GAGCGCGGGG TGCGGCTGCT GGACGTGCCG GTCACCGGAG GGGTGGCCGG GGCCCGGCGC
GCGGCCCTGA CCCTGTTCGC CTCCGGCGAC CCCGAGGCCC TCCGGCGGTG CGGGCCGGTG
CTGGAGGCGA TGGGCACGGT CCGCGACTGC GGAGACCAGG CCGGACGCGG ACAGTCCTAC
AAGGTCGTCA ACCAGCTCCT GTGCTCGGTG CACATCGCCG CCGCGGCCGA GGCGCTGGCC
CTGGCCGAAC GCCTCGGGCT CGACCCCGCC GACGTGCTGG AGGCCGTCTC CGGCGGCGCC
GGGGGCTCCT GGATGCTCGG CGACCGCGGC CCGCGCATGC TGCCGGACGG CCCCGACGAG
ATCACCAGCA CCATCGGGAT CTTCGTCAAG GACTCCGGGC TCGTCGCCGA CACCGCCGAG
GAGGCCGGGT TCTCCGCCCC GCTGCTCCTG GCCGCCCGCG GCGCCTACAC CAGGGCCGCC
GAGGCCGGTC TGCTCGACCA CGACGACTCC CAGGTCATCC GGGTCTACCG GGACTGA
|
|---|
| Protein sequence | MDTTPVPQPC PKTAVMFVGV GAIGLPMALQ VAAAGHTVVG VDPSPRRREE ARNQGLRAQP
DTAGIGEADV VIVMVATPDQ LRAAVTAPGG ALEAMRADAV LVVMSTVGPG PVREVADRAR
ERGVRLLDVP VTGGVAGARR AALTLFASGD PEALRRCGPV LEAMGTVRDC GDQAGRGQSY
KVVNQLLCSV HIAAAAEALA LAERLGLDPA DVLEAVSGGA GGSWMLGDRG PRMLPDGPDE
ITSTIGIFVK DSGLVADTAE EAGFSAPLLL AARGAYTRAA EAGLLDHDDS QVIRVYRD
|
|---|
| |