Gene Ndas_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2467 
Symbol 
ID9246317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2928058 
End bp2929671 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content72% 
IMG OID 
ProductBCCT transporter 
Protein accessionYP_003680393 
Protein GI297561419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCCA CTCTGCGCTC ACGCGCGTCC GCGCGAGGCA GACGTTCCGA TCCCTGGGTC 
ATGAGCGTGT CCGGCGCCCT GATGACCGCC TTCGTCCTCG CCGCCCTGGT CGCCCCCCGC
GCCATGGGCT CCGCCGTGGA CGCGGCCTTC ACCTGGTCCG CGCGCTGGTT CGGCGCCTAC
TGGCAGCTGC TGATGCTGGC CACCTTCGTC GTCATGACCG TCCTGGCCTT CTCCCGCTAC
GGGCGGGTCC GCATGGGCGG CACCGACAAA CCCGAGTTCA AGCGGTTCAC CTGGATCGCG
ATGGTCGTCA CCACCCTGCT GGCCGCCGGA GGGGTGTTCT GGGCGGCGGC CGAACCCATC
GCCCACTACG CCTCCCCGCC GCCGCAGTAC GCCGACCAGG TCGACGGCGG AGCCGAGGGC
GCGGCGGTGG CGCTGGCGCA GAGCTTCGTG CACTGGGGCT TCATCGGCTG GGCCGTCGGC
GGCGCGCTGG CCACCCTGGT CATGATGCGC GGTGTCGAGA AGGGCATGCC GCTGCGCCCG
CGCACCCTGC TGTGGCCGCT CCTGGGCGAG CGGGTGCGCA CGCACTGGAT CGGCGCGGTC
GCCGACATCA GCTGCGTGCT CGCCGTGGTG GCCGGGACCG TGGGGCCGAT CGGCTTCCTC
GGGCTCCAGA TCTCCTACAT CTGCAGCGAG CTGTTCGGGC TGCCCGACAC CTACGCCGTC
CAGGCGCTGA TCATCCTGGG CCTGACCGCG GTGGCCGCGG TGTCGGTGCT GAGCGGGATC
CACAAGGGCA TCCAGCTGCT GAGCCGGGCC AACGTCTGGG TGGCCCTGGC GCTCATCGCC
GTCATCGTCG GCATGGCGTC GCTGCCCTTC GTCGTCAACC TGTTCCTGCA GGCGAGCGCC
GTGCACGCCC GGGAGTTCCT CCCGATGGCG CTGTACCGGG GCGACGAGCA GTGGCTCGGG
TACTGGACGC TGTTCTTCTT CGGCTGGTTC CTGGGCTTCG GGCCCATGAT GGCGGTCTTC
TTCGCCCGCA TCTCACGGGG CCGCACCGTG CGCGACATCT ACGTCGGGGC GACGGTGGTG
CCCTCGGTGG TGACCATGCT CTGGTTCACC GCGCTGGGCG GCACCGGCAT CTGGCTGGAG
CAGCGCGAGC CCGGCACGAT CACGGGCCCC TACGCCGAGG ACGGGCTGCC CGCGGCGGCG
CTGGCCATCC TGGAGGCGCT GCCGCTGACC GGAGCGCTGG GCGTGCTGAT GGTGGTCGTG
GCGCTGATCT TCCTGGCGTC CACGCTCGAC TCCATGTCCT ACACCATCGC GGTCTCCAGC
ATGCACGAGG GAGAACCCTC GGGCCTGGTC CGCGCGTTCT GGTGCGTGGG GATGGGGCTG
GCCGCCGTCG CACTGCTGCT GGTGGGGGAC GGCGGGATCC AGGCGTTGCA GTCCTTCATC
GTGGTGACCG CGGTGCCCGT CGGCCTGCTC ATGCTGCCGA CGCTGTGGAC CACGCACCCG
CTGCTGCGCG ACATGGCGGT AGAGCAGGGC ATCGTCGCCC CGCGCCCGTC ACGGGACGGG
GACGGCGACC ACGCGCCGCG GGCCGGGGAG CCGGTCGGCC AGGCCTCCCC GTAG
 
Protein sequence
MFSTLRSRAS ARGRRSDPWV MSVSGALMTA FVLAALVAPR AMGSAVDAAF TWSARWFGAY 
WQLLMLATFV VMTVLAFSRY GRVRMGGTDK PEFKRFTWIA MVVTTLLAAG GVFWAAAEPI
AHYASPPPQY ADQVDGGAEG AAVALAQSFV HWGFIGWAVG GALATLVMMR GVEKGMPLRP
RTLLWPLLGE RVRTHWIGAV ADISCVLAVV AGTVGPIGFL GLQISYICSE LFGLPDTYAV
QALIILGLTA VAAVSVLSGI HKGIQLLSRA NVWVALALIA VIVGMASLPF VVNLFLQASA
VHAREFLPMA LYRGDEQWLG YWTLFFFGWF LGFGPMMAVF FARISRGRTV RDIYVGATVV
PSVVTMLWFT ALGGTGIWLE QREPGTITGP YAEDGLPAAA LAILEALPLT GALGVLMVVV
ALIFLASTLD SMSYTIAVSS MHEGEPSGLV RAFWCVGMGL AAVALLLVGD GGIQALQSFI
VVTAVPVGLL MLPTLWTTHP LLRDMAVEQG IVAPRPSRDG DGDHAPRAGE PVGQASP