| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2439 |
|---|
| Symbol | |
|---|
| ID | 9246289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2892809 |
|---|
| End bp | 2893870 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_003680365 |
|---|
| Protein GI | 297561391 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.107589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCGC GCTCCGGGGC CCTGGGTCCC CGAACGGGGG TGGCCCGCCT GGGCGGACTG
TCGGTACGGG TGTACTGGCC CGCGGTACTG CTCGGCGGCC TGCTCACCGC CCTGGCCGCG
GCGGTGGCCC TGGTCTCGCT GACCCTGGGG GACTTCGAGC TGGGCGTGAG CGAGGTGGTG
GACGCGCTCA CCGGCCGTGC CGGGGTGATG GTGACGCACG TGGTGGTGGA GATGCGGCTG
CCGCGTGTGC TCACCGCGCT GGGTGTGGGC GCCGCACTGG CGCTCTCGGG GGCGCTGCTG
CAACGGCTGG CGCACAACCC GCTGGTCAGC CCGGACGTCA TCGGGGTCAG CGCGGGCGCG
ACGACCGCGG CGGTGCTCGC CATCGTCGTC TTCGGCGGCA CGGCGGCGGC GATCGCGGCC
AGCGCGCTGG CGGGGGCCGT GGCCACCGCG TTCCTGCTGT ACCTGCTCGC CTACCGGCGC
GGTGTCAGCG GGCAGCGGCT GGTCCTGGTG GGGATCGCGG TCACCGCGGT GCTGGGCGCG
GTGACGTCGT ACCTGCTCAC CCGCACGGAG CTCGCCACGG CGCAGCGCGC CATGCTCTGG
CTCACCGGCA GCCTGGCCAA CCGGGACTGG CCGCACGTGG TGACGGTGGC GGTGGGGTTG
GCCGTCCTGG CTCCGACCAC GTTCCTGTCG GCCCGACCGC TGTCCCTGCT CCAGCTCGGG
GAGGACGCGG CGACCGCCCT GGGCGGCCGG GTGCGGCTCG CCCGGGGCGC CCTGCTGTTC
ACCTCCGCCG CGCTCGCGGC CACGGCCACC GCCGTCGCCG GTCCCGTCGC GTTCGTCGCC
CTGGTGGCCC CGCAGATCGT GCGGCGGCTG CTGGGCGGAC GCGCCCTCGG GCTGCTGCCC
TGCGCCGCCT GCGGAGCGCT CCTGACGGCC GTTGCGGACC TGGTCGCGCG CACCGCCTTC
GGGGGGAGCG AACTGCCGGT CGGGGTGGTC ACCGGGGCGC TGGGCGCCCC CTTCCTGCTG
TACCTGCTGG CCCGCGGCGG CAGGGCGGGA CGGGACCGGT GA
|
|---|
| Protein sequence | MTARSGALGP RTGVARLGGL SVRVYWPAVL LGGLLTALAA AVALVSLTLG DFELGVSEVV
DALTGRAGVM VTHVVVEMRL PRVLTALGVG AALALSGALL QRLAHNPLVS PDVIGVSAGA
TTAAVLAIVV FGGTAAAIAA SALAGAVATA FLLYLLAYRR GVSGQRLVLV GIAVTAVLGA
VTSYLLTRTE LATAQRAMLW LTGSLANRDW PHVVTVAVGL AVLAPTTFLS ARPLSLLQLG
EDAATALGGR VRLARGALLF TSAALAATAT AVAGPVAFVA LVAPQIVRRL LGGRALGLLP
CAACGALLTA VADLVARTAF GGSELPVGVV TGALGAPFLL YLLARGGRAG RDR
|
|---|
| |