| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2421 |
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| Symbol | |
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| ID | 9246271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 2870399 |
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| End bp | 2873218 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003680347 |
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| Protein GI | 297561373 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.924633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0586657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGC CCCGGACGCG GCGCGGCGGG ATCGTGGGCA GGACCGAACC GCTCACGAGG
CTGCTGTCGG CCCGTCAACA CAGCCGCCGT ACGGGGCTCA CCTGTCACGT GGTGACGGGA
GAGCCCAGGG TGGGGCGGAC CACCCTGCTC TCCCTGGTGT GCCGCCCCAC ACCGTCCCGC
GCCGGTCCCG CGGTGCACAT CGCGTGCTCC CGGCACGTGA ACCGCCTGGT CACCGCGCTC
ACGGACGCCC TGGCCCCGAC CGCCGACGAA CACCCCGCCG AGGAGGGGGA GGGGGGTTCC
ACCGTGTCCC CGCGCGCCCG CGCCGGGACC GCGCACGCCC GGGGAGCGGG AGGCGGACCG
GCCGGCCCCC GGGAGCTGGT GGAGGTGCTG ACCCGGGACG CCCCCCTGGT GATCGCGCTG
GACGACGTCG ACCAGGCGGG GCCCGAGTCC CTGGTCCGGT TGCGGGGCGT CCTGCGGGAC
GTCGCCCACC TTCCCGTGAC GCTCGTCGCC TCGATCCGGA GCGGAGAACC GGCCGCGGCT
CCGACCGAAC TCGCCGACCT GCTGTCCGGC GCCCGCACCA TCACCCTGCG CGGGCTGTCG
GAGGAGGAGA CCGGCGCGCT GATGCACGAG CGGCTGGGCC ACCGGCTCGA CGCGGACCTC
GTCACGGCGT CCCACGAGAC CACCGCCGGC AACCCGTTCC TGACGCGGGC CCTGTGCGAC
TGGATCCGGG CCCGCGAATC CCCGGTGCGC TCACCGGCCG AGCTGCGAAG CGCCGTGCTC
CCCTCCGTGG CCGACGCCAT GATCGGCCGG GCGAACCGCT TCGACCCGCG GGCCCGGGCG
GTCGCCGAGG CGGTCGTCGT CGCCTCGGCC TCCGGGGAGG CCGACCCCGC TCTGGTCGCG
CACCTCAGCG GAACCCGGCT CGCGGAAACG CTGGCCGCGC TCGACCTCCT GGCTCGGATG
CGCCTGGTCA CCGACGACCA CGCGGTGACG CTGCGCCACC CGTTGCTCCA CACCGCGCTG
CTCGCCTCCA TGACCGTGAT GAGCCGCAAC GCGGCGCACC TGGCCGCCGC CGCCTTCCTG
CACCGCAGAC CCGGCGCGGA GCGGCGGGTG GCCCGTCACC TCGCGGAGTC GACGGTGCCC
CTGGACGCCC CGTGGTCGTC CACCGCCCTG ATCACGGCCG CACGGCTCCC CGACACGGCC
GCGCGGGACC GCGTGCGCTA CCTGGAGCAG GCCGTCCAGG CCGGGGGAAC GGGCGCGTGG
CCCGGTGTCG CCCCCGAACT GGCGGCCGCC CGGATCGCAC TCGACCGACA GGGCGGCCTG
CGCGCCGCGG TGGAGGCACT CGGTCGCACC ACCGACGTCG CGGTCCGTCG CCGCCTGCTC
GGCCTGATCG GCGCGACGCT CTGCGAGGGC GAACGCGGCG ACGACGCGTC CGCCGTCCTG
CGGACGGTGC GGGAGGCCGT CGCCGGAACG GAGCGGGAGG ACTGGCCGCG GACCTTCCTC
ACCCACGGGC GGTCCCTGAC GCCCGAGCCG GCGGCCGCCC GTCCGGTCGA AGGGGCTCCC
GTCCCCGACG ACGTGCCGCG CCCTCCCGCC GTCACGGCCA TCGACGCCTT CTCCTCCTAC
CTCCTGGGCG GGCCGCCGTC GGTCGCGCTC GCGGACGTGA GGCAGGCCCT GGACCACGAC
CTCGACGACC TCCTGCTCCA ACCGCCCGCC CTGCCCGCCG CCCTGTCGGT GCTGGTCGGT
TGTGGTCACC AGGCGGAGGC GTCCACGCGT CGGCGCTCCC TCGTCGCCGA TCCGGACCGG
CTGCCCCGCT GGGTGGGCAC GGCGGTCCGG CTCACCGAGG CGACGGGATC CTACGCCTCG
GGCGACCTGT CCGCGGCCCG GCACACGCTC ACGGAGCAGC TCTCGGAACT GCCCTCCCGC
GGTGGTCACG GCTACAGCGG TCTCCGGACC CGCCTGGTCG GCCTCCTGGC CAACGTCCAC
CTGGACCTGG GCGACCCGGA CGCGGCGGAG GCGCTGTTGC GCCGACACCA CCACGACGGC
CACCCGCAGA CCGCGTGGTA CGACGCCGAC GTGCCCCTCG CCCGAGCGCG GCTGAGGATC
AGGGCGGGCG CCCTGTCCCG CGGCGTCGAG GACCTGTTGG AGGTCATCCG ACGCCGCGAC
GCGGCGGGGG TCCGGGGGCC GGGCACGCTC TGCTGGCGGA GCGAGGGCGC CCTCCTCCTG
GCCAGGGCGG GCGCCCGTGA CGAGGCGGTG CGCGACGCCC GCCGACAGAT GGAGTTCGCG
GAGGCGACCG GTTCGCCGCA GGAGCGGGCC CGCGCGCTGC GGGTGTGGGG CGCGCTCGCC
GAGGAGCCCG CTTCGGCGGA GGCGCTGAGC GCGGCGGTCG ACCTGCTCCG GGGCACCGGG
CACGACCTCG AAACCGCACG GACCACGGCG GAGCTGGGCA CGGTGCTGGC GCGGATGGGC
CGCCACGGGG AGGCCGTGGC GGCCCTGAGC CGTTCGGCCG GCCTGGCCGC CAGCCGGGGC
GCGCGTGACC TCGCCGACCG GGTACGGCTC CAGCTGGTGG CCTTGGACGC CTGTCGTGCC
TCACACGACG TCTCCGTGCG GGGCATCCTC GCGCTGACCC CGCGCGAACG GCAGATCCTC
ATCGACGCGC TGCTGGGCCA GGCCAACAAG ACGATCGCCG GACGTCGGCA CATCACCCGT
CGCACGGTGG AACTGCACCT GTCGAGCGCC TACCGCAAGC TGGGCATCTC CGGGAGGGGA
GAGTTCGGCA AGATCCTCGG CAGCCCCGGA AGGTGGGAGA TCCTCGTCGG CGGGGAGTGA
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| Protein sequence | MPEPRTRRGG IVGRTEPLTR LLSARQHSRR TGLTCHVVTG EPRVGRTTLL SLVCRPTPSR
AGPAVHIACS RHVNRLVTAL TDALAPTADE HPAEEGEGGS TVSPRARAGT AHARGAGGGP
AGPRELVEVL TRDAPLVIAL DDVDQAGPES LVRLRGVLRD VAHLPVTLVA SIRSGEPAAA
PTELADLLSG ARTITLRGLS EEETGALMHE RLGHRLDADL VTASHETTAG NPFLTRALCD
WIRARESPVR SPAELRSAVL PSVADAMIGR ANRFDPRARA VAEAVVVASA SGEADPALVA
HLSGTRLAET LAALDLLARM RLVTDDHAVT LRHPLLHTAL LASMTVMSRN AAHLAAAAFL
HRRPGAERRV ARHLAESTVP LDAPWSSTAL ITAARLPDTA ARDRVRYLEQ AVQAGGTGAW
PGVAPELAAA RIALDRQGGL RAAVEALGRT TDVAVRRRLL GLIGATLCEG ERGDDASAVL
RTVREAVAGT EREDWPRTFL THGRSLTPEP AAARPVEGAP VPDDVPRPPA VTAIDAFSSY
LLGGPPSVAL ADVRQALDHD LDDLLLQPPA LPAALSVLVG CGHQAEASTR RRSLVADPDR
LPRWVGTAVR LTEATGSYAS GDLSAARHTL TEQLSELPSR GGHGYSGLRT RLVGLLANVH
LDLGDPDAAE ALLRRHHHDG HPQTAWYDAD VPLARARLRI RAGALSRGVE DLLEVIRRRD
AAGVRGPGTL CWRSEGALLL ARAGARDEAV RDARRQMEFA EATGSPQERA RALRVWGALA
EEPASAEALS AAVDLLRGTG HDLETARTTA ELGTVLARMG RHGEAVAALS RSAGLAASRG
ARDLADRVRL QLVALDACRA SHDVSVRGIL ALTPRERQIL IDALLGQANK TIAGRRHITR
RTVELHLSSA YRKLGISGRG EFGKILGSPG RWEILVGGE
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