Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2401 |
Symbol | |
ID | 9246251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2850762 |
End bp | 2851481 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | DNA alkylation repair enzyme |
Protein accession | YP_003680328 |
Protein GI | 297561354 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.306134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACCG CACCGCTGAC CGCCCGCGCC TTCCTGGCGC GCCTCGACGA GCACCGCAGC GACGAGGAAC TCCGCAAGTA CCAGCGCTAC TTCCGCTTCG AGGCCGGACA CCAGCCCGAG GACGACTACT TCGTCGGGGT GCGCATGGGC ACGGTGTTCG CCCTGGCCAA GGAGTTCGTG GACATGCCCC TCGACCAGGT CGAGGAGCTG ATGGACAGCC CTGTGCACGA GGCCCGGGCC GGGGCGATGA GCATCATGGA GAAGAAGGCC CGCCACCGGC GCAGCACGCC CGGACAGGTC GCCGCGCTCG CCGAGCTGTA CCTGCGCCGC CACGACCGCG TCAACAACTG GGACCTGGTG GACCTGGCCG CGCACCACGT CCTGGGCCGC CACCTGCGGG ACCGCCCCCG CGGGGTCCTG TACACCCTGG CGCGTTCGGA CGACCCGTGG CGGCGGCGCA CCGCCATCGT GGCGACGGCG CACTTCATCG CCCACGACGA CCTCGACGAC GCCTTCGCCC TGTCCGAGAT CCTCCTGGGC GACGACCACG AACTGGTGCA GAAGGCGGTG GGGTGGATGC TCCGAGCCGC CGGTGACAAG GACCGCGACC GGCTGCTGGC CTTCCTCGAC ACCCACGCCG CGCGGGCCCC GCGCCCCCTG CTGCGCGCCG CGATCGAGAA GCTCGACCCC GGACAGCGCG CCCACTACCG CGGGCGCTGA
|
Protein sequence | MATAPLTARA FLARLDEHRS DEELRKYQRY FRFEAGHQPE DDYFVGVRMG TVFALAKEFV DMPLDQVEEL MDSPVHEARA GAMSIMEKKA RHRRSTPGQV AALAELYLRR HDRVNNWDLV DLAAHHVLGR HLRDRPRGVL YTLARSDDPW RRRTAIVATA HFIAHDDLDD AFALSEILLG DDHELVQKAV GWMLRAAGDK DRDRLLAFLD THAARAPRPL LRAAIEKLDP GQRAHYRGR
|
| |