| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2381 |
|---|
| Symbol | |
|---|
| ID | 9246231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 2829949 |
|---|
| End bp | 2831982 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
|---|
| Protein accession | YP_003680308 |
|---|
| Protein GI | 297561334 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.932979 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGATG TCGTCGAACA GCTCCTCGCC CGCAGCAACA CCCTCGGCGC CGACCCGCGC
AACACCAACT TCGCCGGGGG CAACACCTCC GCCGCGGACA CCCGCACCGA CCCCGTCACC
GGACAGGACG TCGACCTGCT CTGGGTCAAG GGCTCCGGCG GCGACCTGGG CACCCTCACC
GAGGACGGCC TGGCCGTGCT GCGCCTGGAC CGCCTGCGCG CCCTCGTGGA CGTCTACCCC
GGCGAGGACC GCGAGGACGA GATGGTCGCC GCCTTCGACC ACTGCCTGTT CGGCAGGGGC
GGCGCCGCGC CCTCCATCGA CACCGCCATG CACGGCCTGC TGCGCGCCGC GCACGTGGAC
CACCTGCACC CCGACTCCGG CATCGCCCTG GCCACCGCCG CGGACGGCGA GCGCCTGACC
CGCGAGTGCT TCGGCGACCG CGTGGTGTGG GTGCCCTGGC GCCGTCCCGG GTTCCAGCTC
GGCCTGGACA TCGCCCGTAT CGCCGAGGAG AACCCCGACG CCATCGGCGC GATCCTGGGC
GGCCACGGCA TCACCGCCTG GGCCGAGACC AGCGAGCAGT GCCAGGCCAA CTCCCTGGAG
ATCATCCGCA CCGCCGAGGG GTTCTTGGAG GAGAACGGCC GCCCCGAGCC CTTCGGCCCC
GTCCTGGAGG GCTACGGCGC CCTGCCCGAG GCCGAGCGCC GCCAGCGCGC CGCCGCCCTG
GCCCCGGTCA TCCGCGGGCT GGCCTCCACC GACCACCCCC AGGTGGGCCG CTTCACCGAC
AACGACGTGG TCCTGGACTT CCTGGCCGGG GCCGAGCACC CCCGCCTGGC CGCGCTGGGG
ACCTCCTGCC CCGACCACTT CCTGCGCACC AAGGTCCGGC CCCTGGTGCT CGACCTGCCC
GCCGACGCCC CGCTGGAGCG GGCCGTGGAG CGCCTGCGCG AACTGCACGG GGAGTACCGG
GCCGAGTACC GCGCCTACTA CGAGCGCCAC GCCGACGCCG ACAGCCCCGC CATGCGCGGC
GCCGACCCGG CGATCGTGCT GGTCCCCGGG GTGGGCATGT TCTCCTTCGG CAAGGACGCC
AAGACCGCGC GCGTGGCGGG CGAGTTCTAC GTCAACGCGA TCAACGTGAT GCGCGGCGCC
GAGTCCGTCT CCACCTACCG GCCCATCGAG GAGTCGGAGA AGTTCCGCAT CGAGTACTGG
GCGCTGGAGG AGGCCAAGCT CGCCCGCCTG CCCGAGCCCA AGCCGCTCGC CGCCCGGGTC
GCCCTGGTCA CGGGCGCGGC CAGCGGTATC GGCAAGGCCA TCGCCGCCCG CCTGGCGCGC
GAGGGCGCCT GCGTGGTCGT GGCCGACCTG GACGCCGACA GGGCGGCCGC CGCCGCGGCC
GAACTGGGCG GCTCCGACAC GGCCGTGGGC GTGGCCTGCG ACGTCAGCGA CGCGGACGCG
GTGGCCCGCG CCTTCGCCGC GGCGGCCCTG GCCTTCGGCG GCGTGGACCT GGTGGTCAAC
AACGCCGGGC TGTCCATCTC CAAGCCGCTG CTGGAGACCA GCGAGCGCGA CTGGGACCTT
CAGCACGACG TCATGGCCAA GGGGTCCTTC CTGGTCTCGC GCGAGGCGGC CAGGACGATG
ACCGCCCAGG GCATGGGCGG CGACATCGTC TACATCGCCT CCAAGAACGC CGTGTTCGCC
GGTCCCAACA ACGTCGCCTA CTCCGCGGTC AAGGCCGACC AGGCCCACCA GGTGCGGCTG
CTGGCCGCCG AACTGGGCGG CGAGGGAATC CGGGTCAACG GCGTCAACCC CGACGGGGTG
GTGCGCGGCT CGGGCATCTT CGCCGGGGGC TGGGGCGCCC AGCGGGCCAA GGTGTACGGG
GTCAGGGAGG AGGACCTGGG CGCGTTCTAC GCCCAGCGCA CCATCCTGGG CCGCGAGGTG
CTGCCCGAGC ACGTGGCCAA CGCGGTGTTC GCGCTGACCG CGGGCGAGCT GTCGCACACC
ACCGGCCTGC ACATCCCCGT GGACAGCGGC GTCGCCGCGG CCTTCCTGCG ATGA
|
|---|
| Protein sequence | MSDVVEQLLA RSNTLGADPR NTNFAGGNTS AADTRTDPVT GQDVDLLWVK GSGGDLGTLT
EDGLAVLRLD RLRALVDVYP GEDREDEMVA AFDHCLFGRG GAAPSIDTAM HGLLRAAHVD
HLHPDSGIAL ATAADGERLT RECFGDRVVW VPWRRPGFQL GLDIARIAEE NPDAIGAILG
GHGITAWAET SEQCQANSLE IIRTAEGFLE ENGRPEPFGP VLEGYGALPE AERRQRAAAL
APVIRGLAST DHPQVGRFTD NDVVLDFLAG AEHPRLAALG TSCPDHFLRT KVRPLVLDLP
ADAPLERAVE RLRELHGEYR AEYRAYYERH ADADSPAMRG ADPAIVLVPG VGMFSFGKDA
KTARVAGEFY VNAINVMRGA ESVSTYRPIE ESEKFRIEYW ALEEAKLARL PEPKPLAARV
ALVTGAASGI GKAIAARLAR EGACVVVADL DADRAAAAAA ELGGSDTAVG VACDVSDADA
VARAFAAAAL AFGGVDLVVN NAGLSISKPL LETSERDWDL QHDVMAKGSF LVSREAARTM
TAQGMGGDIV YIASKNAVFA GPNNVAYSAV KADQAHQVRL LAAELGGEGI RVNGVNPDGV
VRGSGIFAGG WGAQRAKVYG VREEDLGAFY AQRTILGREV LPEHVANAVF ALTAGELSHT
TGLHIPVDSG VAAAFLR
|
|---|
| |