Gene Ndas_2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2366 
Symbol 
ID9246216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2814594 
End bp2815433 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003680294 
Protein GI297561320 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.828638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGATC GCACCGGGCT GGCCGAGTTC CTCCGCACCC GCCGGGAAGC GCTGCAACCC 
GAGGACGTCG GGCTGCCGCG CGGGCAGCGC CGCAGGACCA GCGGACTGCG GCGCGAGGAG
GTCGCCGCGC TGTGCCACAT GTCGACCGAC TACTACTCGC GGCTGGAGCG GGAGCGCGGA
CCGCGGCCGT CGGGACAGAT GCTCTCCTCC ATCGCCCAGG GGCTGCACCT GTCACTGGAC
GAGCGCGACC ACCTGTTCCG CCTGGCCGGA CACAACCCGC CCCCGCGCGG CACGGTCAGC
GACCACGTCA GCCCCGGCCT GCAACGGGTC CTCGACCGCC TGGACGACAC GCCCGCGGAG
ATCGTCACCG AACTCGGCGA GACCCTGCGC CAGTCCCCGA TGGGCGTCGC GCTGACCGGG
GACACGACGC GGTTCACGGG GCCCGAACGC AGCTCGGGGT ACCGGTGGTT CACCGATCCC
GACTCCCGAA GGATCTACGC GCCCGAGGAG CACCCGTTCC TCACCCGCAT GTACGCCTCG
GGTCTGCGCG AGATCGTCAC CCTGCGCGGC CCCGACTCGC GGGCCGCCCG CCTCGCCGAC
CTGCTCCTGG ACCGGAGCGA GGAGTTCCGG CGGGTGTGGG AGGACCACGA GATCGGTGTG
CGCCCCCACC ACGTCAAGCA CTTCGTGCAC CCCGAGGTCG GTCCCCTGGA GCTGAACTGC
CAGAGACTGG TCGACCCCGG CCAGGCCCAC TCGCTGCTCG TCTACACCGC CGTCCCCGGC
AGCGAGAGCC ACGACAGGCT GCACCTGCTG TCGGTCATCG GAGCCCGGGC GCTGGGCTGA
 
Protein sequence
MIDRTGLAEF LRTRREALQP EDVGLPRGQR RRTSGLRREE VAALCHMSTD YYSRLERERG 
PRPSGQMLSS IAQGLHLSLD ERDHLFRLAG HNPPPRGTVS DHVSPGLQRV LDRLDDTPAE
IVTELGETLR QSPMGVALTG DTTRFTGPER SSGYRWFTDP DSRRIYAPEE HPFLTRMYAS
GLREIVTLRG PDSRAARLAD LLLDRSEEFR RVWEDHEIGV RPHHVKHFVH PEVGPLELNC
QRLVDPGQAH SLLVYTAVPG SESHDRLHLL SVIGARALG