Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2338 |
Symbol | |
ID | 9246188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2789637 |
End bp | 2790278 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003680266 |
Protein GI | 297561292 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.857275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.161469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGGTG GTGCGGGTGC TTCCGGCCGG ACGTACCGGA AGGCCGAGAA GCGGCGGTCA CAGATCCTGT CGCGCGCGAT CGAGGTGTTC GCCGAGCACG GAGTGGGCGC TTCGCTGCGG GCGATCGGCG AGGCCATCGG GGTGTCCCAC GCGGCGCTGC GCTACTACTT CGCCTCCCGC GACGAGCTCC TGGTGGAGGT CTACCGCGAA CACGAGGCGA CGGGGTGCGA GCCCTCGGAT CCGGGCACCG TCTCCGCGGT CGCGGTGATG GAGCGCAGCG CGGAGCGCAA CCGCTCCATA CCCGGCCTGG TCGAGCTGTA CGCGACGCTG ACGACGGACG CGTTGCAGGA GCAGCGGCAC CCCGCGACGC GGGAGTTCGT CCGGGCCCGG TTCCGGGCAC TGCGCGCCGA CCTCGCCGAG CGCGTACGCG CCGGTCAGCG CTCCGGTGAG ATCGCGGCCG ACATCGACCC GGACGACGCG GCGGCCCTGG TGATCGCCGC GTCCGACGGG TTGCAGTTGC AGTGGCTGCT CGACCCGCGG GAGGTGGACG TCTACCGCTC GCTCCAGGTC CTGGAACGGC TGCTGCCCGG CGGGGGAGAG GGCGGCGGGA CCGGTGGCGG GGCGTCGGTC CAGGCCACGT GA
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Protein sequence | MNGGAGASGR TYRKAEKRRS QILSRAIEVF AEHGVGASLR AIGEAIGVSH AALRYYFASR DELLVEVYRE HEATGCEPSD PGTVSAVAVM ERSAERNRSI PGLVELYATL TTDALQEQRH PATREFVRAR FRALRADLAE RVRAGQRSGE IAADIDPDDA AALVIAASDG LQLQWLLDPR EVDVYRSLQV LERLLPGGGE GGGTGGGASV QAT
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