Gene Ndas_2336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2336 
Symbol 
ID9246186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2787731 
End bp2788468 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content73% 
IMG OID 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_003680264 
Protein GI297561290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.791708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.26673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACAA CATCCGTGCA GCTGTACTCG GTCCGTGACG AACTCGCCGA CGGCCTGGAG 
AGCGCCGTGG CACGCCTGGC CGAGATCGGC TTCGCCCACG TGGAGCCGTA CGCGTTCCAC
CTGGACACCG AGGAGTACCG GCGCGTGTTC GCCGCGACGG GCGTCACCGC GCCCTCCGGC
CACGCCCCCG TGATCGACGC GCAGGCCCCC GAGGAGATCT TCGACGCGGC CGCCGAACTG
GGCGTCGCCA CGGTCATCGA CCCGCTGGTC CCGGCCGAGC GGTGGCAGAC CGCCGACCAG
GTGGCCGGAC TGGCCGAGCG CGTGAACCGG CTGGCGGAAC TGGCCGCCGA GCGGGGTCTG
GAGTTCGGCT ACCACAACCA CGCCTGGGAG CTGAGCACCC GCATCGGCGA CAGGCACGCG
CTGGAGGTGT TCGTGGAGCA CCTGGAGCCG CGGGTCGTGC TGGAGGTGGA CACCTACTGG
GCGGGGGTCG GCGGCGCCGA CGCCGCCGCG CTGCTGCGGG CCTTCGGCGA CCGGGTTCGG
CTGATCCACG TCAAGGACGG CACCCTGGAC GGCGACGTGA CACGGCAGCG GCCCGCGGGC
GAGGGCGAGG TCGACGTCCG CGCGGTCCTG GAGGCCGCGC CGGGGGCGAT CCGCGTGGTC
GAGTTCGACG CCTACGCGGG CGACGTGTTC GACGGCATCG CGCGGTCGCT GGCCTGGCTC
GGGGAGAACG ACCGATGA
 
Protein sequence
MPTTSVQLYS VRDELADGLE SAVARLAEIG FAHVEPYAFH LDTEEYRRVF AATGVTAPSG 
HAPVIDAQAP EEIFDAAAEL GVATVIDPLV PAERWQTADQ VAGLAERVNR LAELAAERGL
EFGYHNHAWE LSTRIGDRHA LEVFVEHLEP RVVLEVDTYW AGVGGADAAA LLRAFGDRVR
LIHVKDGTLD GDVTRQRPAG EGEVDVRAVL EAAPGAIRVV EFDAYAGDVF DGIARSLAWL
GENDR