Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2336 |
Symbol | |
ID | 9246186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2787731 |
End bp | 2788468 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003680264 |
Protein GI | 297561290 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.791708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.26673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGACAA CATCCGTGCA GCTGTACTCG GTCCGTGACG AACTCGCCGA CGGCCTGGAG AGCGCCGTGG CACGCCTGGC CGAGATCGGC TTCGCCCACG TGGAGCCGTA CGCGTTCCAC CTGGACACCG AGGAGTACCG GCGCGTGTTC GCCGCGACGG GCGTCACCGC GCCCTCCGGC CACGCCCCCG TGATCGACGC GCAGGCCCCC GAGGAGATCT TCGACGCGGC CGCCGAACTG GGCGTCGCCA CGGTCATCGA CCCGCTGGTC CCGGCCGAGC GGTGGCAGAC CGCCGACCAG GTGGCCGGAC TGGCCGAGCG CGTGAACCGG CTGGCGGAAC TGGCCGCCGA GCGGGGTCTG GAGTTCGGCT ACCACAACCA CGCCTGGGAG CTGAGCACCC GCATCGGCGA CAGGCACGCG CTGGAGGTGT TCGTGGAGCA CCTGGAGCCG CGGGTCGTGC TGGAGGTGGA CACCTACTGG GCGGGGGTCG GCGGCGCCGA CGCCGCCGCG CTGCTGCGGG CCTTCGGCGA CCGGGTTCGG CTGATCCACG TCAAGGACGG CACCCTGGAC GGCGACGTGA CACGGCAGCG GCCCGCGGGC GAGGGCGAGG TCGACGTCCG CGCGGTCCTG GAGGCCGCGC CGGGGGCGAT CCGCGTGGTC GAGTTCGACG CCTACGCGGG CGACGTGTTC GACGGCATCG CGCGGTCGCT GGCCTGGCTC GGGGAGAACG ACCGATGA
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Protein sequence | MPTTSVQLYS VRDELADGLE SAVARLAEIG FAHVEPYAFH LDTEEYRRVF AATGVTAPSG HAPVIDAQAP EEIFDAAAEL GVATVIDPLV PAERWQTADQ VAGLAERVNR LAELAAERGL EFGYHNHAWE LSTRIGDRHA LEVFVEHLEP RVVLEVDTYW AGVGGADAAA LLRAFGDRVR LIHVKDGTLD GDVTRQRPAG EGEVDVRAVL EAAPGAIRVV EFDAYAGDVF DGIARSLAWL GENDR
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