Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2326 |
Symbol | |
ID | 9246176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2776387 |
End bp | 2777241 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003680254 |
Protein GI | 297561280 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00147679 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTTCG GATACGGCAC CAACGGCTTC TGGGACCACC GGCTGGACGA CGCGCTGGCC CTGATCGCCG ACCTCGGCTA CGAGGGGGTG GGGCTGACGC TGGACCACCC GCACCTGGAC CCCTTCACGC CGGACGCCTT CGCGCGCACC GCGCGCATCG GTCGGCGGCT GTCCGAACTG GGGCTGGCGG TGGTCGTGGA GACCGGTGCC CGCTACCTGA TGGACCCGCG CCGCAAGCAC GAGCCCACCC TGGTCTCCGA CGAGGGCGCC GAGCTGCGGG TGGACCTGCT GCGCCGCGCG GTGCGCGTCG CCGACGACCT GGGGGCCGAG GCCGTCTCCT TCTGGTCGGG CATCCTCCCG GCGGGGGTGA GCCGGGAGCG GGGCTGGTCG CGGCTGACCT CGGGCGTGGA GCGGGTCCTG GCCACCGCCG ACGACCTCGG CGTGGACTGC GCGTTCGAGC CCGAGCCCGG CATGTTCGTA GAACGGGTGG CCGACGCGCT GGAGCTGCGC GAGCGGCTGG GCGACCCGCC GCGCCTGCGG GTGACGGTGG ACGTCGGGCA CGGCGTGTGC AACGAGCCGG ACGGCCCCGA GGGCGCGGTC CGGCGGGCCG GGGCCCTGAT CGCCAACGTC CAGCTGGACG ACATGCGGCC GGGCGTGCAC GAGCACCTGG AGTTCGGCGA CGGCGAGATC GACCTGCCCG GGGTCCTGGG CGCTCTGGAG GATGTCGGCT ACCGGGGTCT GGCGTCGGTG GAGCTGCCCC GCCACGGGCA CGCCGCTCCC CTGGTGGCCG AGCGGTCGAT CCGCGCGCTC ACGCGGGCGC TGGCCGACTC CCGCGCGCGG AGGGCGGGGG TGTGA
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Protein sequence | MRFGYGTNGF WDHRLDDALA LIADLGYEGV GLTLDHPHLD PFTPDAFART ARIGRRLSEL GLAVVVETGA RYLMDPRRKH EPTLVSDEGA ELRVDLLRRA VRVADDLGAE AVSFWSGILP AGVSRERGWS RLTSGVERVL ATADDLGVDC AFEPEPGMFV ERVADALELR ERLGDPPRLR VTVDVGHGVC NEPDGPEGAV RRAGALIANV QLDDMRPGVH EHLEFGDGEI DLPGVLGALE DVGYRGLASV ELPRHGHAAP LVAERSIRAL TRALADSRAR RAGV
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