Gene Ndas_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2309 
Symbol 
ID9246159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2756791 
End bp2757561 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content60% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003680237 
Protein GI297561263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCAAC ACGATTTCGG TGCATACCTG GCCGAAGAGC GCAATAACTC TGGCTACACC 
CTCCGCAAGC TTGCGGCGCT GGTGAACCTG AGCCCATCGA CCATCTCCCG ATGGGAGAAC
AACCACGTAG TTCCGCTTCG GAGCGAAGTG GAGAAAGTGG ACAAAGCACT GGAGTTGCAG
GGGCGGCTTG TCAGCGTGTG GGAGTTCGCG AAGGCGGAAG GGCTCCCGCA GTGGATGCAC
AGCGTCTCGC GACTGGAGGA GGCAGCCGAG GCGATAGACC TCATATCTCC CTTGCTGGTG
CCCGGGTTGT TGCAGTCTCC GAGTTACGCG CGACTGGTGT TCGAGGAGTC GCTGATGGGA
CGCGAGCCGG GTGACCTTGA ACGCTTGGTG GAACTGAGGT GTGGCAGGTA CGAGCAGTTG
CGAAAGCTCA ATAACCCTCG GACCATCGCG GTCTTCCCTG TGACGGCGGT GACCTGCGTC
CCTGACCGGG TTCGGAAAGA GCAGGCTTCA CACCTTTTGT CCATTGCTGA AATGGGCAGG
ATGCGCTTCC ATCTGGTCCC GGAGGACTCC ATCCTGCTCG GGGTGACGTC CATGCTGCTG
CTGTTCCATC TTCGTGATGG TGGGAAAGCG GCTGTGAGCG ACCATGTGGA CGGCGCTACC
TTGTATGAGG ACACGAAGGT GTACGACCGC TTGCATGGTC TGGTGAAACA AGCACTGGGT
AGCGCTCTCC CCGCCACCCA GTCACGAAAG CTTCTGGAGG AGCTACGGTG A
 
Protein sequence
MVQHDFGAYL AEERNNSGYT LRKLAALVNL SPSTISRWEN NHVVPLRSEV EKVDKALELQ 
GRLVSVWEFA KAEGLPQWMH SVSRLEEAAE AIDLISPLLV PGLLQSPSYA RLVFEESLMG
REPGDLERLV ELRCGRYEQL RKLNNPRTIA VFPVTAVTCV PDRVRKEQAS HLLSIAEMGR
MRFHLVPEDS ILLGVTSMLL LFHLRDGGKA AVSDHVDGAT LYEDTKVYDR LHGLVKQALG
SALPATQSRK LLEELR