Gene Ndas_2278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2278 
Symbol 
ID9246128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp2726561 
End bp2727883 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content69% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_003680206 
Protein GI297561232 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.384645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.214719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAG CACCCAAAGT GGCCCCCGGG GAATGTTCCC CGGCCGTGGC CGCGCTGGCC 
GGTGCGCGCG AGATCATCCA CCAAGCGTTG AACGCCGAAG TCCCGCCCGG GGCCGACGAG 
ACCGCCGCGG AGGAGATCGC GGCGCTGTGG GCGCAGCTGG ACCAGATCCG GTATCAGGCG 
TTGACGCAGA TGGCGCGCCT GTACGCACGT GGTGAGGTCG CCCGTTACAG CGGCTACAGC 
ACGTTGGACA AGTGGATCAC CCATCGCTGC AAGGTCCCCA CTGCCCAGGC CAAGGATTTG 
GCCCGTTTGG CCCAGCACGT GCAGGAGGAG ACGTTGCCCG CCACTGCCCA AGCAGTAGCT 
GAGGGCAGGG TGGTGTTGGG TGAGGCGGTC GCGATCGCCA AAGCCACCGA CAAAGCCGTC 
CAGACCCGCG ATGAGGACCA CTTTCCCGAT GAGGGGGAGT ACCGGCAGGG GTTCGAAGCG 
GCTCTGGTGG CGGCCAAGGC GGAGCGGCCC GCGTTGTCGG TCAACCAGCT CCAGTCGGTG 
GCCCGCCAGG TCGCCTACCG TTTGGACCCC CACCGCCTGG ACCGCGACCA CGAGGCCGCC 
CATGCCGTCC GCGGGCTGGT AGTGCATGAC ACGTTCCAGG GCAGCTACCA ACTCCAGGCC 
TGGGGTGGGT CCGGGGATGC GTTGGTCGTG CGCGCGGCCA TCGACACCTT CGACGTTTCG 
CACTCGGATG AGGACACGCG CAGTCGTTCG CAGCGTGAGC ACGACGCGCT CATCGCGGCG 
CTGCGTTTTG CCACCACCCA CACCGGATGC GGCAACGCTC CGGCTCCGTT GGCGCAGATC 
CGCATCGTGG TGCCCGTGCA GACCTACCTG GACGCCCAAG GCCAGGAGGT TCCGGCGTTG 
GACGAGCACG GTCGGGTGAT CCCAGCCGGT GTGGTCCACG AACTGGCCGC CGATTCCGAG 
GTGGTGCGGA TGCTCACCGC ACCCCCCACC GGACAGGTGC TGGACGTGGG CCACAGCCGC 
CGCCTGGCCT CAACCCGCCA ACGCACCGCC GCCTTCCACG GACACGCCAC CTGCGCCCAC 
CCGGGCGGAT GTGAGGTACC GGTGGCGTTG TGCCAGGCCG ACCACGTCAC CTCGTTCTCC 
CGGGGCGGGC GCACGGTGGT GGCCAACCTG CAACCGTTGT GCGGGCCGCA CAACCGGGCC 
AAGTACCAAC GCGAACTCCG CACACACCAC CACCAGGGAC AAGGACAAGG GCGGGGATGG 
GGACGAGGAC GGGGAGGAGA CCACCCACCC GGCAGGGATC CGGATCCACC ACCCCGGAAA 
TGA
 
Protein sequence
MIAAPKVAPG ECSPAVAALA GAREIIHQAL NAEVPPGADE TAAEEIAALW AQLDQIRYQA 
LTQMARLYAR GEVARYSGYS TLDKWITHRC KVPTAQAKDL ARLAQHVQEE TLPATAQAVA 
EGRVVLGEAV AIAKATDKAV QTRDEDHFPD EGEYRQGFEA ALVAAKAERP ALSVNQLQSV 
ARQVAYRLDP HRLDRDHEAA HAVRGLVVHD TFQGSYQLQA WGGSGDALVV RAAIDTFDVS 
HSDEDTRSRS QREHDALIAA LRFATTHTGC GNAPAPLAQI RIVVPVQTYL DAQGQEVPAL 
DEHGRVIPAG VVHELAADSE VVRMLTAPPT GQVLDVGHSR RLASTRQRTA AFHGHATCAH 
PGGCEVPVAL CQADHVTSFS RGGRTVVANL QPLCGPHNRA KYQRELRTHH HQGQGQGRGW 
GRGRGGDHPP GRDPDPPPRK