| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2277 |
|---|
| Symbol | |
|---|
| ID | 9246127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2724489 |
|---|
| End bp | 2725898 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003680205 |
|---|
| Protein GI | 297561231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.419016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.219783 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCA CACCACCGGA GACGGACGCC ACCGGCGCCC CCTCCGCCGA TCCCGGCCAG
CGCAGGCGCG AACAGCGCGG CTGGTACCTC TATGACTGGG CCAACTCGGT GTTCACCACC
TCGGTGGTGA CCGTGCTCAT CGGCCCGTAC CTGAGCAACC TGGCGTGTGT GTCGGCCGGG
GCCCCTGACG CCGCGTCCTG CCTGGACCCC GCGCTGTCCA TCAGCCCGCT GGGCCTGGAC
TTCCTCTCGC TGCACCCCAA CGCGCTCTAC CCGGCGCTGA CCACGGTGGC GATCCTGCTC
CAGATCCTGT GCCTGCCGAT CGTGGGGTCG ATGGTCGACC ACTCGCGGCA CAAGAAGCGG
TGGCTGCTCT GGCTCGCCGT AGGCGGGTCG GCGTGCACGC TGGGGCTGTA CTTCGCCACC
GACGGCTACC TGGTGGCCTC GGTACTGTTC GTGCTGGCCA ACCTGCTGTA CGGGCTGGCG
GGCGTGGTCT ACAACGCGTT CCTGCCCGAG GTGGCCACGG CCGAGGAACG CGACCGGGTC
TCGGTCACCG GCTGGGGCAT CGGCTACCTC GGCGGGGCCC TGCTGCTCGC CATCCACCTG
GGCCTGGTGG TCGGCGCTCC GTCCCTGGGC CTGGGCACGG ACGACGCCGC GCGCATCGCC
TTCGCCTCCT GCGGCCTGTG GTGGGCGGGG TTCACCGTCC TGGCGGTGCG GCCGCTGCGC
AACCGCTACG GCGCCCTGGC GGCGAGCAGC CGGGGGCGGC CGAAGGTGGG ACGGTCGCTG
CGCCAGTTCG GGCACACGCT CAAGGACATG CGCAAATACC CGAACACGAT TCTCTTTCTC
CTGGCGTTCA TCCTGTTCAA CGACGGTGTG CAGGCGGCCA TCCGCTACGC GGCGCCCTTC
GCCACCCAGG ATCTGGGACT GGACCAGAAC GTCCTGATCG TCACCATCCT CATCATCCAG
TTCGTGGCCT TCGGGGGCGC CTTCCTGACC GGCCGGGTGG CCCGGGTCCT GGGCAGCAAG
AACACCGTGC TGGCCACGCT CGCGGTGTGG AGCTCGCTCG TGGCGGCGGC CTACTTCCTC
CCGGTCGGGA ACGTGCCGCT GTTCGTGGCC ATGGGCGTGG GCATCGGCCT GGTGCTGGGC
GGCACCCAGT CGCTGGCCCG GTCGCTGTAC TCCCAGCTCA TCCCCCGTGG GCGCGAGGCG
GAGTACTTCA GTCTGTACCA GATCTCGGAC AAGGGATCGA GCTTCCTGGG ATCGCTGACC
GTGACCGTGG CCGTCTCCCT CACCGGCGGC TACCGGATGG CGATCCTGTC GCTGATCGTG
TTCTTCGTCA TCGGCGGTCT GCTGCTGTGG CGCACACGCA TGCGCGAGGG GATTCTCGCG
GTGGGCAACG AGGTACCGCG CAACCTGTAG
|
|---|
| Protein sequence | MATTPPETDA TGAPSADPGQ RRREQRGWYL YDWANSVFTT SVVTVLIGPY LSNLACVSAG
APDAASCLDP ALSISPLGLD FLSLHPNALY PALTTVAILL QILCLPIVGS MVDHSRHKKR
WLLWLAVGGS ACTLGLYFAT DGYLVASVLF VLANLLYGLA GVVYNAFLPE VATAEERDRV
SVTGWGIGYL GGALLLAIHL GLVVGAPSLG LGTDDAARIA FASCGLWWAG FTVLAVRPLR
NRYGALAASS RGRPKVGRSL RQFGHTLKDM RKYPNTILFL LAFILFNDGV QAAIRYAAPF
ATQDLGLDQN VLIVTILIIQ FVAFGGAFLT GRVARVLGSK NTVLATLAVW SSLVAAAYFL
PVGNVPLFVA MGVGIGLVLG GTQSLARSLY SQLIPRGREA EYFSLYQISD KGSSFLGSLT
VTVAVSLTGG YRMAILSLIV FFVIGGLLLW RTRMREGILA VGNEVPRNL
|
|---|
| |