| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2268 |
|---|
| Symbol | |
|---|
| ID | 9246118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 2711885 |
|---|
| End bp | 2712772 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | rRNA guanine-N1-methyltransferase |
|---|
| Protein accession | YP_003680196 |
|---|
| Protein GI | 297561222 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.32282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.877312 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTA CCGACACCCC ACACACCACC GGCCCCAGGC TGCGCATGCC CGCGGCCGTC
GCGGCGGCCC TGGCCTGCCC CTCCTGCGGA CGCGGGCTCG ACCCGGGCGA GCGCGGGCTC
TCCTGCGGCG CGGGGCACAG CTTCAACGTG GCCAGGGAGG GGTACGCGAG CCTGCTCACC
GGGGCCACGC CGCCCGGGAC CGGCGACAGC CGGGAGATGG TCGCCGACCG CCTCCGGTTC
CAGGAGGCCG GGCACCACGA CCCGATCTCC GCCGCGCTGG CCGCCGCCCT GGCCCGTGAG
CTCACCGCGC CCGCCCCGCT GGTCGCCGAC ATCGGCGGCG GGACCGGGCA CCACCTGACC
CGGGTGCTGG AGGCCCTGCC CGACGCCGTG GGGCTGACCG CCGACGCCTC CAAGTTCGCC
GCACGCAAGG CGGCCAGGGC GCACGAGCGC GGCGGCGCCG TGACCGCCGA CGCCTGGCGG
GGCCTGCCGC TGCGCGACGG CTCCGCGGAC GCCCTGCTCA ACGTGTTCGC GCCGCGCAAC
GCCGCCGAGT TCCACCGCGT CCTGCGCGCC GACGGGGTAC TGCTGGTCCT CGTCCCCGCC
GCCGACCACC TCGCCGAACT GCGCGGACCG CTGGGCCTGC TGGAGGTGGA CCCGCGCAAG
GACGAACGCC TCGCCGACTC GCTGCACGGC CACTTCGCCC CGGCCGGGGC CGAGGACCTG
CGCTTCACCA TGGACCTGGA CCACGCCGAC GCCGCGACCG TCGTCGGCAT GGGGCCCAGC
GCCCGCCACA TCGACGCCGG GGACCTGCGC GCCCGCATCG CCGCCCTGCC CGAACCCGCG
GCCGTCACGG CGTCGGTGCG CCTGCACCTC TACCGCCCGC TCCGCTGA
|
|---|
| Protein sequence | MARTDTPHTT GPRLRMPAAV AAALACPSCG RGLDPGERGL SCGAGHSFNV AREGYASLLT
GATPPGTGDS REMVADRLRF QEAGHHDPIS AALAAALARE LTAPAPLVAD IGGGTGHHLT
RVLEALPDAV GLTADASKFA ARKAARAHER GGAVTADAWR GLPLRDGSAD ALLNVFAPRN
AAEFHRVLRA DGVLLVLVPA ADHLAELRGP LGLLEVDPRK DERLADSLHG HFAPAGAEDL
RFTMDLDHAD AATVVGMGPS ARHIDAGDLR ARIAALPEPA AVTASVRLHL YRPLR
|
|---|
| |