Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2237 |
Symbol | |
ID | 9246087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2677018 |
End bp | 2678340 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_003680165 |
Protein GI | 297561191 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0384062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.194146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGCTG ACCACCGAGA GCAGCAGCCC AGCCAACAGG GTTCGCGTAT CGACCCGCAC GTCGGCCGCT ACGCACGCCG AGCACAGGGC ATGGTCGCAT CGGAGGTCCG CGCACTCTTC GCCGTCGCCT CGCGCCCCGA GGTGGTCTCC CTCGCCGGGG GCATGCCCAA CGTCGCGGCT CTGCCCCTGG ACCAGATCGG CGAACTGGTC AAGGACGTCG TCTCCGAGGA GGGCGCGGCG GCCCTCCAGT ACGGTTCCGC CCAGGGCGAC CCCGTGCTGC GCGAGCAGCT CTGCGACTAC ATGACGCTGG AGGGCATCAC CGCCAGCCCC GACGACGTCA TCGTCACCGT CGGCTCCCAG CAGGCCCTGG ACCTGATCAC CCGCGTCTTC GTCGACCCGG GCGACATCGT GCTGACCGAG GCCCCCACCT ACGTCACCGC GATCAACACC TTCGCCGCCT TCCAGGCCGA CATCCGCCAC GTCGGCATGG ACGAGCAGGG CGTGATCCCC GAGGAGCTGG AGGAGGCGCT CGTCCGCGCC GAGCTGGACG GGCGGCCGGT GAAGTTCTTC TACACCGTCC CCAACTTCCA GAACCCCGCC GGGATCACCA TGACGGCCGA GCGGCGCGCG CGGGTGACCG AGGCCTGCGA ACGCCACGAC GTGCTCATCG TCGAGGACAA CCCCTACGGC CTGCTGCGCT ACGACGGCGA CCCCGAGCCC ACCCTCTACT CCCAGAGCGA GGGCAACGTC ATCTACCTGG GATCGCTGTC CAAGACCCTC TCCCCGGGCC TGCGCATCGG CTGGGCGCTC GCCCCCGCCG CGGTGCGCGC CAAGCTCGTC CTGGCCGCCG AGTCGGCGAT GCTCAGCCAC TCCACCTTCA ACCAGCTGGT GGTGCGCCGC TACCTCAACA CCTTCCCCTG GCGCGAGCAG ATCAAGTCGT TCAACACCAT GTACGGCGAA CGCCGCGACG CGATGCTCAA CGCGCTGACC GCGATGATGC CCGCGGGCTG CACCTGGACC CGCCCCCAGG GCGGATTCTT CGTCTGGGCC ACCCTGCCCG AGGGCATCGA CTCCAAGGCC ATGCTGCCCC GGGCCGTCAC CGAACGGGTC GCCTACGTGC CCGGCACCGG CTTCTACGCC GACGGACGCG GCCGGGCCAA CATGCGCCTG AGCTTCTGCT ACCCCACACC CGAGCAGATC CGCGAGGGAG TGCGCCGCCT CGTCGGAGCC ATCGAGGGTG AGATCGACCT GCGTGATACG TTCGGCACCA CCCTGGCCCC GAGCGCAGAC GGCCCACAGG CCCCCGCTCC GGACCTGCCC TGA
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Protein sequence | MSADHREQQP SQQGSRIDPH VGRYARRAQG MVASEVRALF AVASRPEVVS LAGGMPNVAA LPLDQIGELV KDVVSEEGAA ALQYGSAQGD PVLREQLCDY MTLEGITASP DDVIVTVGSQ QALDLITRVF VDPGDIVLTE APTYVTAINT FAAFQADIRH VGMDEQGVIP EELEEALVRA ELDGRPVKFF YTVPNFQNPA GITMTAERRA RVTEACERHD VLIVEDNPYG LLRYDGDPEP TLYSQSEGNV IYLGSLSKTL SPGLRIGWAL APAAVRAKLV LAAESAMLSH STFNQLVVRR YLNTFPWREQ IKSFNTMYGE RRDAMLNALT AMMPAGCTWT RPQGGFFVWA TLPEGIDSKA MLPRAVTERV AYVPGTGFYA DGRGRANMRL SFCYPTPEQI REGVRRLVGA IEGEIDLRDT FGTTLAPSAD GPQAPAPDLP
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