Gene Ndas_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2234 
Symbol 
ID9246084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2674308 
End bp2675072 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content76% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003680162 
Protein GI297561188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00670227 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.180357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCCC GTCCGCGCGG CGGCGGGGTC GCCGTGGTCA CCGGCGGCGG GAGCGGGCTG 
GGCCGGGCGG GCGCCCTGGC CCTGCTCGCG GACGGGTGGT CGGTCGCGGT GGCCGGACGG
CGCGCGGGCG CGCTCGAGGA GACCCTGGCC CTGGCGGGGG CGGACGCGGA CCGGATGGCG
GCCGTCCCGA CCGACATCAG GGACCCCGAC GGGGTCGCGT CGCTCTTCGC GGCCGTGCGC
GAGCGCTTCG GCCGGGTGGA CCTGCTGTTC AACAACGCGG GCGCGGCCGT GCCGCGCAGG
CCGGTCGAGG ACATGCCCCT GGACGACTGG GACAGGGTGG TGGGCACCGT CGCCACCGGA
GCCTTCCTGT GCTCGCGCGA GGCCTTCCGG GTGATGCGGG ACCAGTCGCC GCGGGGTGGG
CGCATCATCA ACAACGGCGC CCCGTCGGCC CACGTGCCGC GGCCGTACAC CATCGCCTAC
ACCGCGGCCA AGCACGCCCT GCTGGGGATG ACGCGCGCCC TGGCTCTGGA CGGGCGCAGG
TACGGGATCG CCTGCGGGCA GATCGACGTG GGCAACGTGG CGCCGGTGGA CGGGGGGCCG
CAGCCCGCGG CGGTCCAGGC GGACGGGACG AGGGCCGTGG AGCCGGTGAT CCCGGTGGAG
CGGTTCACCG AGTCGCTGAC GCTGATGGCG TCGATGCCCC TGGACGCCAA CGTCCAGTTC
CTCACCGTCC TGCCGACCGC GATGCCCTTC GTCGGGCGGG GGTGA
 
Protein sequence
MTPRPRGGGV AVVTGGGSGL GRAGALALLA DGWSVAVAGR RAGALEETLA LAGADADRMA 
AVPTDIRDPD GVASLFAAVR ERFGRVDLLF NNAGAAVPRR PVEDMPLDDW DRVVGTVATG
AFLCSREAFR VMRDQSPRGG RIINNGAPSA HVPRPYTIAY TAAKHALLGM TRALALDGRR
YGIACGQIDV GNVAPVDGGP QPAAVQADGT RAVEPVIPVE RFTESLTLMA SMPLDANVQF
LTVLPTAMPF VGRG