Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2205 |
Symbol | |
ID | 9246055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2635324 |
End bp | 2636415 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | transport system permease protein |
Protein accession | YP_003680133 |
Protein GI | 297561159 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.264091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000202612 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCCGCA CCCTGACACC CCGCCGCCCG CGCGAGCGCG CCCGCACCAC ACCCCGCGGC TCCTTCGCCC TGCGCCTGTT CGGCGAACGC CTGTCCCTGC TGGTGCGCCC GCGCACCCTC GTCGTCGCCG CCGTCCTGAC CGCGCTCAGC GCCGCCGCCC TGATCGTCTC GGTGGCCGTG GGCGACTACG AGATCCCGCT CGGCGCCGTG CCCGCCGCGA TCGCGGGCTA CGGCGAACGC CTGGACGTGT TCTTCGTCCA AGGGGTGCGC CTGCCCCGCG CCCTGACCGC CATCGGCGTG GGCGCCGCCT TAGGGCTCGC CGGAGCCGTC TTCCAGAGCC TGTCGCGCAA CGCCCTGGGC AGCCCCGACA TCATCGGCTT CACCGGCGGC GCCGCCACCG GAGCCGTCGC CGTCATCCTG CTCTTCGGCG CCGGACGCCT GGGCGTGTCC CTGGGCGCCA TCGCCGGGGG CATGCTCACC GCCGCCGCCG TGTACCTGCT CTCCACCAAG AACGGCGTCC AGGGCTACAG GCTGGTCCTG GTCGGCATCG GCATGGCCGC CATGCTCGGC GCCGTCCGCG ACTACCTGCT CACCCGAGCC GAACTCACCG ACGCCCTCGG CGCCCAGATC TGGATGATCG GCAGCCTCAA CGGCCGCGGC TGGGCCGAGG TCGCGGCCGT GTGGATCTGC CTGGTCCTGC TGGGACCGGT CCTGCTCGCC CTGGGCCAGC GCCTGCGCTT CATGGAACTG GGGGAGGACA CCGCGCGCGG CCTGGGCGTG CCCACCCGCT CCACCCAGCT GACCGCCCTG GCCGCCGCCA GCGCCCTGAC CGGCGCCGCC ATCGCCGTCT CGGGCCCCAT CGGCTTCGTC GCCCTGGCCG CACCCCAGCT GGCCCGCCGC CTGATGCGCA CCGGCGGCAC CACCCTGGCC GGATCCGCGC TCATGGGCGC CGCCCTGCTG GCGGTGGCCG ACCTGGTCGC GCTGCGCGCC CTGGCCCCCA CCCAGCTGCC CGTGGGCGTG GTCACCGCCG TCATCGGCGG CAGCTACCTG ATCTGGTTGC TCTACACCGA ATGGCGCGGC GGACGTGCCT GA
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Protein sequence | MSRTLTPRRP RERARTTPRG SFALRLFGER LSLLVRPRTL VVAAVLTALS AAALIVSVAV GDYEIPLGAV PAAIAGYGER LDVFFVQGVR LPRALTAIGV GAALGLAGAV FQSLSRNALG SPDIIGFTGG AATGAVAVIL LFGAGRLGVS LGAIAGGMLT AAAVYLLSTK NGVQGYRLVL VGIGMAAMLG AVRDYLLTRA ELTDALGAQI WMIGSLNGRG WAEVAAVWIC LVLLGPVLLA LGQRLRFMEL GEDTARGLGV PTRSTQLTAL AAASALTGAA IAVSGPIGFV ALAAPQLARR LMRTGGTTLA GSALMGAALL AVADLVALRA LAPTQLPVGV VTAVIGGSYL IWLLYTEWRG GRA
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