Gene Ndas_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2201 
Symbol 
ID9246051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2632719 
End bp2633177 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content74% 
IMG OID 
ProductRoadblock/LC7 family protein 
Protein accessionYP_003680129 
Protein GI297561155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.590655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000219247 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGATGA CGGCGGACGC TGCGGCGGGA GACAGGACGG CCGAGGCGGT GGAGGGGCAG 
TCCCCGGCCA GGACGCTGGA CTGGCTGCTG GGCGACCTGG TGCGGCGGGT GGCGGGGGCG
CGGCACGCGC TGTTGCTGTC GGCGGACGGG CTGCTGCTGT CGTGCTCGGA CGACCTGGGG
CGCGAGCAGG GTGAGCGGCT GGCCGCGATC GCGTCCGGTT TCGCGAGCCT GGCCCGTGGC
GCTCGGGGGC AACTGGGGGC CGCGGAGGTG CGTCAGACGG TGGTGGAGAT GGACAACGTG
TTCTTCTTCG TGCTGGCCGC CGGTCAGGGC GCGTCGCTGG CGCTGGTGGC CGAGTCCACG
TGCGACATGG GCCAGGCGGC GTTCGAGGTG AACCGTCTGG TGCGCCAGGT GGGTCCGCAC
CTGTCGGCGC TGCCGCGGCG CGGGAGTGTG AGGAGGTGA
 
Protein sequence
MSMTADAAAG DRTAEAVEGQ SPARTLDWLL GDLVRRVAGA RHALLLSADG LLLSCSDDLG 
REQGERLAAI ASGFASLARG ARGQLGAAEV RQTVVEMDNV FFFVLAAGQG ASLALVAEST
CDMGQAAFEV NRLVRQVGPH LSALPRRGSV RR