| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2200 |
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| Symbol | |
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| ID | 9246050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 2630410 |
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| End bp | 2632719 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | putative sensor with HAMP domain |
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| Protein accession | YP_003680128 |
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| Protein GI | 297561154 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.930898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000377518 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCACA ACAAGCGCCG TTCGCTTCGC GCCCGCATGA TCACGCTGGT CCTGTTCCCC
AGCACCGTGC TGCTGGCCCT GTGGGCCGCC TTCACCGCCC TGCTCGTCGG CGACATCGGT
GAACTGCGCA CCACCGCCAC CTTCACCGAA CAGGTCGGCG TCCCCGTCGA GGAGACCATC
AGCGCGCTCC AGCGCGAACG CCGCGCCACC ATGGACGCGG CCTGGGGCAC CGAGCGCACC
GCCCTGTACC TGACCTACTC GCGCCAGCGC ACCGACGAGG CCGTGGACGC CCTCAGCCGG
AGCCTGGACG CCTTCGACGT GCAGGACCTG CCCGAACAGG CCCTGGCCTT CCGCGCCGCC
GTCAACCGCG TCGACACCCT GCGCGCCCGG GTGGACGCCT CCTCCCCCAC CGAGATCGAC
CTGGAGGAGA CCTCCACCGT CTACGACGAG GTCATCGAAC AGGGCCTGCG CGTGTGGGAC
GGCCAGGTCG AGCGCGCCGA CCCCGCCCAG GCCCCGCACC TGCGCTCCCT GACCTCGCTG
ATGCGCACCC GCGAACTCCT CAACCAGCAG GACACCGTCC TGGCCCACGC GGTGGCCACC
AACTCCTTCC CCGTCCAGGC CCACGCACAG TTCGCCGCCG CGGCCGGAGC CCAGCACTAC
ACCTGGGACC GGGTCGTGGT CGAGATGAGC GAGGAGGACG GCCAGGACTA CATCGAGCTG
GAGTCCTACA GCGAGGTGCA GCGCATCTAC CAGCTCCAGG AGAGCATCAT CTCCATGCCC
GTGCGGGGCG GGGCCACCGT GCCGGTCAAC GCCACCGCCT GGCAGGGCGC CGCCGAGGCC
GTGGACGCGC GCATGCGCGA CGTCGAACAG GGCCAGATCG ACCGGGTCAT CGCCTTCAGC
CGCTCGCAGT CGGCCGAGCT GCGCACCAGC GTCCTGCTGG TGAGCGTGCC CGCCCTGGTG
GCCGCCCTGG TCTCCTCCGC GGTCGCGGTG GGCGCCACCC AGCGCCTGGG CAGGCGCCTG
CAGGACCTGC GCACGGCCAC CCTGGAGCAC GCCCGGGTGC GCCTGCCGGA GGTGACCGCA
CGGCTGCGCG CGGGCGGCAG CGTGGACGTG GACGCCGAGG TGCCGCGGCT GCGGGTGGAG
AGCACCGACG AGGTCGGGCA GGTGGCCGAG GCCTTCAACG ACGCCCAGCG CGCGGCCGTG
GCGGCGGCGG TGGAGGAGGC GCAGGTGCGC GCGGGCGTGC GCAACATGTT CCGCAACATC
GCCCGGCGCA CGCAGGCGCT GGTGCACCGC CAGCTGGGGC TGTTGGACGC GCTGGAGCGC
GCCGAGACCG ACCCCAAGGT GCTGGAGTCG CTCTTTCGCA TCGACCACTT CAGCACGCAG
ATGCGGCGCA ACGCCGAGAA CCTGATGCTG CTCAGCGGGG ACGCCCCCGT GCGGCGGGGA
CTGGCGCCGG TGCGCCTGCA CGAGGCGGTG CGGGCCGCGG CCAGCGAGAT CGAGGACTAC
GTGCGGGTGC GGGTGCTGGC GGTGCCGGCG GTGGCGCTGC GCGGCGAGGT GGGCGCGGAC
ACCGTGCGGC TGCTGGCGGA GCTGCTGGAG AACGCCACGT CCTTCTCGCC CCCGGGCACG
GAGGTGACGG TGCGCGGCCG GGCCGGGGAG GCGGGCGGGT GCGTGCTGGA GGTGCGCGAC
CGGGGGCTGG GGATGACGCG GGAGCAGTTG GAGGCGTCCA ACGCGCTGCT GCGCGACCCG
CCGCGCTTTG ATCTGGCCCG GATGCGCGAG GACTCCCAGC TGGGGTTGTT CGTGGTGGCC
ACCATCGCCG CGCGCCACGG CCTGGAGGTG ACGCTGAGCG CCGGGCCCGA GCGCGGCGCG
TGCGCGGTCG TGGCCGTTCC CGCCGACGCG CTGGCGGACC AGGGCGCGGG CGCCGCGGAG
CCGGGCGGGG ACCGGGAGGC CGCGACCGCG CGGTCGCAGC GGCTGGTCCT GGCGGGCGGG
GTCGAGGAGC GGGCGGCGCG GGAGGACGGG GCCCGGGCCG CGCCCGAGAC CGCGGACGCG
GCCGGGGACG AGGACACGGG CGATACCTAC AAGGGTCTGC CCCGGCGGCG GCGCAAGGGC
GTGCAGCCCT CCCCCGCGCC CGCCCCGGCC GCGCCCGGGC ACCCCGGGGA GTCCGGGGGC
CGGGAGGCGG CGGCCGAGCG GTCGCTGACC GAGATCCGGT CGATGATGAG TGCTTTCCAG
TCCGGGAGCC TGCGCGGGCG CGCACAGCCC CTGGACGGGG ATGGAGACGG CGTGCGCGGT
GCGCGCCCCG GTGAGAGCTC GGAAGGGTGA
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| Protein sequence | MPHNKRRSLR ARMITLVLFP STVLLALWAA FTALLVGDIG ELRTTATFTE QVGVPVEETI
SALQRERRAT MDAAWGTERT ALYLTYSRQR TDEAVDALSR SLDAFDVQDL PEQALAFRAA
VNRVDTLRAR VDASSPTEID LEETSTVYDE VIEQGLRVWD GQVERADPAQ APHLRSLTSL
MRTRELLNQQ DTVLAHAVAT NSFPVQAHAQ FAAAAGAQHY TWDRVVVEMS EEDGQDYIEL
ESYSEVQRIY QLQESIISMP VRGGATVPVN ATAWQGAAEA VDARMRDVEQ GQIDRVIAFS
RSQSAELRTS VLLVSVPALV AALVSSAVAV GATQRLGRRL QDLRTATLEH ARVRLPEVTA
RLRAGGSVDV DAEVPRLRVE STDEVGQVAE AFNDAQRAAV AAAVEEAQVR AGVRNMFRNI
ARRTQALVHR QLGLLDALER AETDPKVLES LFRIDHFSTQ MRRNAENLML LSGDAPVRRG
LAPVRLHEAV RAAASEIEDY VRVRVLAVPA VALRGEVGAD TVRLLAELLE NATSFSPPGT
EVTVRGRAGE AGGCVLEVRD RGLGMTREQL EASNALLRDP PRFDLARMRE DSQLGLFVVA
TIAARHGLEV TLSAGPERGA CAVVAVPADA LADQGAGAAE PGGDREAATA RSQRLVLAGG
VEERAAREDG ARAAPETADA AGDEDTGDTY KGLPRRRRKG VQPSPAPAPA APGHPGESGG
REAAAERSLT EIRSMMSAFQ SGSLRGRAQP LDGDGDGVRG ARPGESSEG
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