| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2189 |
|---|
| Symbol | |
|---|
| ID | 9246039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2616442 |
|---|
| End bp | 2617932 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003680117 |
|---|
| Protein GI | 297561143 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000683339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000292513 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCATA TGCAACAGTC ACCGACGGGC CCTCACCTCC CGCGAAACGC CCACCGCACC
CAACCCGGGC CCCGCTCACC CCGCACGCGG GGGACACACG GGGGAGGGGC GCCCGTCAAC
ACCACACCGG GCGACGCCCG GGCCGCGAAC ACACCCCACC CCCGAACACA CCCCCAGCCT
CACCCCGCCG GGGGAGGCGC CACCGCCCCC GCCTGTGCCA CGATCACCCA CGTGCGCCAC
CTCACCCCGC TCCTGCGCCC GCTCACCAGC GCCCACACCT ACCGGCGCTG GGCCTACCTC
GTCATCGGCG GCGCGCTCCT GATGCCCTAC GCCATGGCCG CCCTCGTCCT GGCGACCCTC
GTCAACCCCA CCCCCGCACC CGCCGCCTTC GCCCTGACCC TCACCGCGGC CCTGGCCGCC
GTCGCCGCCA CCGCCTACCT GCCCGGCACC CGCAGCGCCC AGACCCACCT GGCCCGCGCC
CTGCTCCGCG GCCCCCTCAC CTCCACACCC CGCCCCAACC CCACCTGGCG CAGCAACGCC
CGCACCAGCC TGTGGCTGTG CCTGCACATG CTCACCGGCA TGGCCGTGTG CCTGCTCACC
ATGGTCGCCC TGACCGAGGC CGCCCTCCTG GCCGTCGCAC CCCTGACCCG CGACGTCGCC
ACCATCGCCC AGGGCCCCCT GACCTTCATG GGCCAGACCG CCCTGACCCC CGCCCAGCGC
GCCCTGGGCC CCCTCATCGG CCTCGCCCTG CTCGCCGCCC TGGTCTACAC CACCGCCCTG
GTCGGCCACC TGCTCACCCT GGCCGCACCC CGCCTGCTGG GCCCCTCACC CACCGAACGC
CTGGCCGCCG CCCAGGCCCA CGCCCACACC CTCGCCGAAC GCAACCGTCT GGCCCGCGAA
CTCCACGACT CCCTGGGCCA CGCCCTGTCC GTGGTCACCC TCCAAGCCGC CACCGCCGCC
CGCCTGCTCG ACACCGACCC CGACTTCGCC CGACAGGCCC TCACCCACAT CGCCGACCAG
GCCCGCACCG CCACCGCCGA CCTCGACCAC GCACTGGGCA TCCTGCGCGA GAACACCCCC
ACCCCACGCA CCACACCCCC TGACCTGGCC CACCTGCCCC ACCTGGCCCG CGCCACCCAA
CACACCGGCA CCGACCTGAC CCTGCACCTG AACGGCGACC CCGCACACGT CCCCGCCCTG
CTCTCCCGCG AGACCTACCG CATCAGCCAA GAAGCCCTCA CCAACGCCCT GCGCCACGCC
CCCGGCCAAC CCCTCACCCT CACCCTGGAC ATCACCCCCA CCGCCCTGAC CCTGACCCTC
ACCAACCCCC TCCCGCCCAC CCGCGCCCAC CGCACCCCGC GAGGGCGCGG CCACCACGGC
ATCACCGGCA TGCGCGAACG AGCCCACCTG CTCGGCGGCA CGCTCACCGC CGGCCCCCAC
CACGGCACCT GGCGCCTGAC CTGCCGCCTG ACCTGGAAAG AACAACCGTG A
|
|---|
| Protein sequence | MCHMQQSPTG PHLPRNAHRT QPGPRSPRTR GTHGGGAPVN TTPGDARAAN TPHPRTHPQP
HPAGGGATAP ACATITHVRH LTPLLRPLTS AHTYRRWAYL VIGGALLMPY AMAALVLATL
VNPTPAPAAF ALTLTAALAA VAATAYLPGT RSAQTHLARA LLRGPLTSTP RPNPTWRSNA
RTSLWLCLHM LTGMAVCLLT MVALTEAALL AVAPLTRDVA TIAQGPLTFM GQTALTPAQR
ALGPLIGLAL LAALVYTTAL VGHLLTLAAP RLLGPSPTER LAAAQAHAHT LAERNRLARE
LHDSLGHALS VVTLQAATAA RLLDTDPDFA RQALTHIADQ ARTATADLDH ALGILRENTP
TPRTTPPDLA HLPHLARATQ HTGTDLTLHL NGDPAHVPAL LSRETYRISQ EALTNALRHA
PGQPLTLTLD ITPTALTLTL TNPLPPTRAH RTPRGRGHHG ITGMRERAHL LGGTLTAGPH
HGTWRLTCRL TWKEQP
|
|---|
| |