Gene Ndas_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2188 
Symbol 
ID9246038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2614894 
End bp2616369 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content72% 
IMG OID 
Productamino acid permease-associated region 
Protein accessionYP_003680116 
Protein GI297561142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000662916 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000260404 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACAAGCA GTGCGACGCC GCCCCCGAGC GCGGCCAACC AAACGCAGAC CCCCGGTGCC 
GGACTGGCCC ACTCGCTCCG GCGCCGCCAC ATGGCGCTGA TCGCGATCGG CGGTTCGGTG
GGCGCCGGGC TCTTCATCGG CTCCGGGTCG GTCATCCAGA TGGCGGGCCC GGCGGCGGTG
CTCTCCTACG TCCTGGCGGG GGCGCTGGTG TTCTTCACCC TGCGCGCCCT GGGTGAGATG
GTGGTGGCGG TCCCGGCCGG GGGCTCCTTC TCCGACTACG CCCGCCTGGC CTTCGGTCCC
CGTGCCGGTT TCACCATCGG GTGGGTGTAC TGGTGGATGT ACGCGGTGCT GGTGGCCGCG
GAGTCGGTGG CCGGTGCGGC GATCCTGGGC CAGTGGGTGC CGGGGGTGCC CGGGTGGGCG
CTGGCGCTGC TGGTGCTGTT GTCGATGACG GTGGCCAACC TGGTGTCGGT GCGGGTGTTC
GCCGAGACCG AGTCGTTCTT CTCGTTGGTG AAGGTGGCCA CGATCGTGGC GTTCCTGTTG
ATCGGCGGCC TGTGGGCGGT GGGTCTGTGG AGCGGCGCGG ACGGCTCCAG TGTGGCCAAC
CTGTGGGAGC ACGGCGGGGT GGCGCCCAAC GGGTGGGTGG CGGTGCTGGC CGCCACGGTG
GTGGTGCTGT TCGCCTTCGG CGGGGTGGAG ATCATCACCG TGGCCGCGGG CGAGAGCTCC
GAGCCCGAGC GCGGTGTGGC CTCGGCGGTG ACCAACGTGC TCTGGCGGAT CGGGCTGTTC
TATGTGGCCT CGATCGTGGT GGTGGTGATG GTGCTGCCGT GGAACAGCGT GGATCCGGGG
CGCAGCCCGT TCGTGGCGGT GATGGAGCAC GTGGGTGTGC CCGGGGCGGC GCTGATCATG
GAGATCGTGG TCCTCATCGC GGTGCTGAGC GTGTTGAACG CGGCGATGTA CACCTCCTCG
CGGATGCTGT TCACGCTGAC CCGGCAGGGG GACGCCCCGC GGGTGCTGCG CGGGACCAAC
CGGCGGGGTG TGCCGGTGCG GGCGATCCTG CTCGGCACCG TGGTGGGGTA CGGGGCGGCG
GTGGCCGACT ACCTGTGGCC CGACCGGGTG TTCCCGTTCC TGGTGGCCTC CATCGGCGCG
ATCCTGCTGG TGCTGTTCCT GACCATCTGC GCCTCGCAGC TGGTGGTGGG GGCGCGGGTG
CGTCGGCGTG AGCCGCAGCG GCTGACCCTG CGGATGTGGG CGTTCCCGTA CCTGACGTGG
GTGGTGCTGG GGGGTCTGGT GACGATCTTC GTGGCGATGG TGGTCATCCC CGACCAGCGT
CAGGCGCTGC TGGCGTCGGT GGGGTCGGTG GTGGTGGCGC TGGTGGCCTA TGAGTTCCGG
CGCCGGTGGG GGCGTACGCC GCCCACGGAC CGGGTGCTGG CGGTGCCCGA CCGGCCCGAC
GCGGAGGCGC TGCGCCGTCA CCCGGGCGCC GACTAG
 
Protein sequence
MTSSATPPPS AANQTQTPGA GLAHSLRRRH MALIAIGGSV GAGLFIGSGS VIQMAGPAAV 
LSYVLAGALV FFTLRALGEM VVAVPAGGSF SDYARLAFGP RAGFTIGWVY WWMYAVLVAA
ESVAGAAILG QWVPGVPGWA LALLVLLSMT VANLVSVRVF AETESFFSLV KVATIVAFLL
IGGLWAVGLW SGADGSSVAN LWEHGGVAPN GWVAVLAATV VVLFAFGGVE IITVAAGESS
EPERGVASAV TNVLWRIGLF YVASIVVVVM VLPWNSVDPG RSPFVAVMEH VGVPGAALIM
EIVVLIAVLS VLNAAMYTSS RMLFTLTRQG DAPRVLRGTN RRGVPVRAIL LGTVVGYGAA
VADYLWPDRV FPFLVASIGA ILLVLFLTIC ASQLVVGARV RRREPQRLTL RMWAFPYLTW
VVLGGLVTIF VAMVVIPDQR QALLASVGSV VVALVAYEFR RRWGRTPPTD RVLAVPDRPD
AEALRRHPGA D