Gene Ndas_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2124 
Symbol 
ID9245974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2542854 
End bp2543441 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003680054 
Protein GI297561080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCAGA ATCCGGCGCG CCGGGCGGCC CTGCTCGACG CGGCCATCGA GGTGCTCGCC 
CGCGAGGGCG CGCGGGGGCT GACCTTCCGG GCCGTGGACA CCGAGGCGGC CGTCCCCAAC
GGCACGGCGT CCAACTACTT CAACAACCGC GACGACCTGC TCACCCAGGT CGGCCACCGC
TTCTACGAGC GTCTGGACCC CGACAACAAC GTGATCGCCG CGGCCCAGGC GGGACCGCGC
GACCGCGACA GGGTCGCCGA GCTGATGCAC GAGATGGTGG GGCGCCTCAC CGACTTCCCC
TCCGGCTACC TGGCCCTGCT GGAACTGCGG CTGGAGGCCA CCCGCCGACC GGAGCTGCGC
CAGTTGCTCA CCGAGCGCGT CCGCGCCGAC CTGGACGCCA ACATCGCCTT CCACACCGAG
TCCGGCATGC CCGGCGACGC GTCCACCGTC GTCCTGCTCT ACCTGGCGCT GAACTGGCTC
ATCCTGGAGC GGCTCACCCT GCCCGACCTC TTCTCCCAGG ACCGGTTTCA CGACCTGGTG
ACCGACGTGG TCGAGCACAT CGTCCCCGGC CCCGGCCGCG CGGACTGA
 
Protein sequence
MRQNPARRAA LLDAAIEVLA REGARGLTFR AVDTEAAVPN GTASNYFNNR DDLLTQVGHR 
FYERLDPDNN VIAAAQAGPR DRDRVAELMH EMVGRLTDFP SGYLALLELR LEATRRPELR
QLLTERVRAD LDANIAFHTE SGMPGDASTV VLLYLALNWL ILERLTLPDL FSQDRFHDLV
TDVVEHIVPG PGRAD