| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2098 |
|---|
| Symbol | |
|---|
| ID | 9245948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 2518687 |
|---|
| End bp | 2519643 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | Helix-turn-helix type 11 domain protein |
|---|
| Protein accession | YP_003680029 |
|---|
| Protein GI | 297561055 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCGA CCTCCGCGCG CCTGCTGCGC CTGCTGTCCC TGCTCCAGAC CCGCAAGGAC
TGGCCGGGCG GCGAACTCGC CGACCGCCTC CAGGTGAGTC CGCGCACCGT CCGCCGCGAC
GTGGACCGCC TCCGCGAGCT GGGCTACCCC ATCCAGGCCA CCATGGGTAC CGGGGGCGGC
TACCAGCTCG GCGCGGGCGC CGCCCTGCCG CCCCTGCTGC TGGACGACGA CGAGGCCGTG
GCGGTCGCGG TCGGGCTGCG CACCGCCGCC CAGGGCGGGG TGTCGGGGAT CGAGGAGACC
TCGGTGCGCG CCCTGGCCAA GCTCTTGCAG GTGCTGCCCT CGCGGCTGCG GCGCCGGGTG
GACGCCCTGG GCGCCTTCAC CGTCCCCATG CCCTCCGACG GGCCCACGGT GGACGCCGAC
GTGCTCGCGC TGGTGGCCGC CACCTGCCGG GACAGCGAAC GGCTGCGCTT CGACTACGAG
CGCCACGACG GCAGCGCCTC GCGCCGGGTG GTGGAGCCCC ACCGGCTGGT CTCGCGCGGG
CGGCGCTGGT ACCTGGTGGC CTGGGACACC GAACGCGACG ACTGGCGCAC CTTCCGGGTG
GACCGGATGC GCCCGCTCAC GCCGACCGGA CCGCGGGTGC CCCCGCGCGA CCCGCCCGAG
CAGGGGGTCG CCGCCTACCT GCGGGAACGC ATCGACGTGC ACATGTGGCC CGTGCAGGCG
CGGATCAGGC TGTTCGTCCC GGCGGAGGAG GCCGAGCGCA CGGCGGCGGG CTTCGGGCGG
ATCGAGCCGG TGGACGAGCG CTCGTGCGTT CTGGTGTGCT CCGGGGACTC GCTGCTCCAC
ATGGCCTGCT ACCTGGGCAT GCTCGACGTG GAGATGGAGG TGGAGGAGCC CGCCGAACTG
CGCGGGCACA TGTCGCGCCT GTCGGAGAGG TTCGGCCGCG CGGCGGCCTC GGGCTGA
|
|---|
| Protein sequence | MRATSARLLR LLSLLQTRKD WPGGELADRL QVSPRTVRRD VDRLRELGYP IQATMGTGGG
YQLGAGAALP PLLLDDDEAV AVAVGLRTAA QGGVSGIEET SVRALAKLLQ VLPSRLRRRV
DALGAFTVPM PSDGPTVDAD VLALVAATCR DSERLRFDYE RHDGSASRRV VEPHRLVSRG
RRWYLVAWDT ERDDWRTFRV DRMRPLTPTG PRVPPRDPPE QGVAAYLRER IDVHMWPVQA
RIRLFVPAEE AERTAAGFGR IEPVDERSCV LVCSGDSLLH MACYLGMLDV EMEVEEPAEL
RGHMSRLSER FGRAAASG
|
|---|
| |