Gene Ndas_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2078 
Symbol 
ID9245928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2498393 
End bp2501215 
Gene Length2823 bp 
Protein Length940 aa 
Translation table11 
GC content77% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003680010 
Protein GI297561036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.9735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCCA CGGAAACCAC CACCCATAAT GAGTCGGTGT CCAGTCCAGT GGTCTCGGCT 
CGGGAAGCCG AAGTACTCGC CCTCCTCGGA GAGCACCTCA GCAACGCGGA GATCGCCGCG
CGCCTGGTCC TGTCGGTGCG CACCGTCGAG TCGCACGTCT CCTCGCTCCT GCGCAAACTG
GCGCTGCCGG ACCGGCGGGC GCTCGCCCGG CACGCGACCG CCTCCGCACG CGCCGCGCGC
GAGCGGTCGG CGCCCGCCCT GCCCGCGCCG TTGACGTCGT TCGTCGGCCG GGTCCGCGAG
CGCCGGGAAC TGGCCGGGGC TGTGACGTCG CACCGGCTGG TGACCGTGGT CGGGCCGGGC
GGGGTGGGCA AGACGCGCCT GTCCCTGGCC GTGGCGGCGG ACGTGGCCGA CGACTTCGCC
GACGGGGTGT GGTTCGTCGA CCTGGTCCCG GTCACCGAAC CGGGCCGCGT GGGGGCCGCG
GTCGCGGCGG CCGTGGGTGT GGGCGAGCAG CCCGGAAGCG GCGTCGACGA CACGGTCCTT
GCCGCGCTGG CGGACCGCCG GGCCCTGCTG GTCCTGGACA ACTGCGAACA CGTGCGCGAC
GGGGTGACGC CGTTCCTGGA GCGGCTGCTG GCGGCCTGCC CGCGGCTGCG GGTGCTCGTG
ACGAGCCGGG CCCGGCTGAT GGTGCCGTTC GAGCGTGTCC TCCCGGTCCC GCCGCTGTCG
CGGGACGGCG GCGAGGAGTC GGACGCGGTG GCCCTGTTCA TGGACCGGGC GGCCGTGGGC
GGCTGGCCGC AGGGGCCCGC CGCGAGCGAG GAGGTCGTGG CCGTCTGCGA ACGGCTCGGC
GGCATGGCGC TGGCCATCGA ACTGGCGGCG GCGCGGTGCT CGACGCTGGG GCTGGACGGA
CTCGCCGCCG GGCTCTCCGA CCAGCTGCGG GTCCTCACCG GCGGTTCCCG GGCCGACGAC
AGGCACCGGT CGGTGCGGGC GGTGCTGGAC TGGAGCCACG ACCTGTTGGA GCCGGGGGAC
CGGGCCCTGC TGCGCCGGGT GTCGTTGTTC GTCGCGCCGT TCACCCCCGA GGCCGCCGCC
GGGGTCGCCG GGTTCGCCCC GCTGGATCCG GCCTCGGTCG TCGACGGGCT CGGCAGACTC
GCCGAGCACA GCCTGCTCTC CGTGACACCG TCCGCGACCG GCACCCGCTA CCACGCGCTG
GAGACCATCC GCCAGTACGG GGCGGAGCGG CTCGCCGACA CCGGCGAGCT GACGCGCGTC
CGCTCCCGGC ACCTGGACTG GTGCCTGGCC GGTGCGGCCG CCCTCACCGC GACCGCGGGC
GCGGACTGGC GCGCCCGCTT CGACGCCGTG GCGGAGGACA TGCGGGCCGC CCTCACCTGG
GCCTGCGACC AGCCCGAACA GCGCGCGGAC GCCCACCGGC TCGCCCGCGC CGTGGCCGAG
CTGTCCTTCA CCCGCACCCT GCTCGGCGAG GCCCAGCAGC GGTTCGAGCA GGCGGCGCGG
CTCGCCGACA CCGGCGCCGT CGCCGACGCG CTGCGCCAGG CCGCCGCGGT GGCCGGATGC
CGCGGCCTCG ACGACGACAT GTACCGCCTG CACCGTGCCG CCGCGCACGC CGCCCTCCGG
GCCGGGGACA CCGCGGGCGC GGGCCGCGAC CTGGCGGCCG CCGCCACCGT CGCGTACCGG
TTCTCCAGCT CGTTCACGCG GCTTCCCGCC GTGGAGGAGG TGAGGGACAC GCTCGCGCGG
GCGCGGGAGC TGTCCGGCGA CGCCCCGGCC GCCCGGGCCG CCGTCGCGCT GGCCGAGGCG
GCGGTGGTCG CGGACGCGTT CGGCGCGGTC CAGGGGGATC CGGACAACAC CGCCGGGGAG
ACGGTCGAGA GCGCCGAACG GGCGGTCGCG CTCGCCCGTG GCGCGGGCGA CCCGGTGGCC
GAGTCCGCCG CCCTGGACGC GCTCTCGGGC GCCCAGAGCT GGGCCGGGAA CGCCTTCGCC
GGTGCGGCCG CCTCCCGGCG CAGGGTCGAC ATCCTGGCCC CGCGACCGCC GACCCCCGCC
AGCACGCACG AGCTGATGGA CGCCCTGGCC ATGGCCGCCG GAACCTCCCT CGGCGTGGGG
CGGCTGCCGG AGGCCCGCCG GTGGGGCAGG CAGCTCGCCG ACCACCCGCT GCTGGCCGAG
GCGGGCCACA GCGCCACGTC CTGGCTCCTG GTCGCGGACG CGTTCAGCGG CGACGTCGAC
GGGGTGCTCA CCGGCAGCAC GAGGTTCCTC GACGCGTGGG AGCAGAACGG CCGACCGCGG
ACGCGCTCCC TGGGGCCCGC CGCCGCGTCG GTCGCGATGG TCCACGGCCT GCGCGGCGAC
CACGATGCAC GGGCGGACTG GCTCGCGATC GTCGACCGGG CCGGGTCCGA GGCCGACCAC
CGCCTGGGCT ACGGCGCGGT CTTCGACACC ATGGTCCTGC TCCACCACGG GGACGCGGAG
TCCGCCCTGG AACGCGTCGA ACCGGAGCCG GACCGGGTGT GGAAGTGGGT GTGCTGGGTC
TGGCTCCACT GGTACGTGGC GCTCAGGGCG GAGGCGGCGG TGCTCGCCGG GCACCCCAAG
GCCCGGGAGC GGATCGCCTC CGCCAGGGCC GTGGTCACCG GCAACACGGT CGCCGGTGCC
CAGGTGGACC GCGCGGAGGC GCTGCTCGAC GGCGACCCGG CGGGGCAGCT CGCCGCCGCC
GCGGCGTTCG ACGCGGCCGG TTGCCGCTAC CAGGCGGCGC GCACGCTGGT GCTCGCCGGG
GGTGAGCACG CCGCCGCCGG CGGGGCCGCG CTCACCGGCC TCGGCCTCAC GCCCGGCCGG
TGA
 
Protein sequence
MPATETTTHN ESVSSPVVSA REAEVLALLG EHLSNAEIAA RLVLSVRTVE SHVSSLLRKL 
ALPDRRALAR HATASARAAR ERSAPALPAP LTSFVGRVRE RRELAGAVTS HRLVTVVGPG
GVGKTRLSLA VAADVADDFA DGVWFVDLVP VTEPGRVGAA VAAAVGVGEQ PGSGVDDTVL
AALADRRALL VLDNCEHVRD GVTPFLERLL AACPRLRVLV TSRARLMVPF ERVLPVPPLS
RDGGEESDAV ALFMDRAAVG GWPQGPAASE EVVAVCERLG GMALAIELAA ARCSTLGLDG
LAAGLSDQLR VLTGGSRADD RHRSVRAVLD WSHDLLEPGD RALLRRVSLF VAPFTPEAAA
GVAGFAPLDP ASVVDGLGRL AEHSLLSVTP SATGTRYHAL ETIRQYGAER LADTGELTRV
RSRHLDWCLA GAAALTATAG ADWRARFDAV AEDMRAALTW ACDQPEQRAD AHRLARAVAE
LSFTRTLLGE AQQRFEQAAR LADTGAVADA LRQAAAVAGC RGLDDDMYRL HRAAAHAALR
AGDTAGAGRD LAAAATVAYR FSSSFTRLPA VEEVRDTLAR ARELSGDAPA ARAAVALAEA
AVVADAFGAV QGDPDNTAGE TVESAERAVA LARGAGDPVA ESAALDALSG AQSWAGNAFA
GAAASRRRVD ILAPRPPTPA STHELMDALA MAAGTSLGVG RLPEARRWGR QLADHPLLAE
AGHSATSWLL VADAFSGDVD GVLTGSTRFL DAWEQNGRPR TRSLGPAAAS VAMVHGLRGD
HDARADWLAI VDRAGSEADH RLGYGAVFDT MVLLHHGDAE SALERVEPEP DRVWKWVCWV
WLHWYVALRA EAAVLAGHPK ARERIASARA VVTGNTVAGA QVDRAEALLD GDPAGQLAAA
AAFDAAGCRY QAARTLVLAG GEHAAAGGAA LTGLGLTPGR