Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2078 |
Symbol | |
ID | 9245928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2498393 |
End bp | 2501215 |
Gene Length | 2823 bp |
Protein Length | 940 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003680010 |
Protein GI | 297561036 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.9735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGCCA CGGAAACCAC CACCCATAAT GAGTCGGTGT CCAGTCCAGT GGTCTCGGCT CGGGAAGCCG AAGTACTCGC CCTCCTCGGA GAGCACCTCA GCAACGCGGA GATCGCCGCG CGCCTGGTCC TGTCGGTGCG CACCGTCGAG TCGCACGTCT CCTCGCTCCT GCGCAAACTG GCGCTGCCGG ACCGGCGGGC GCTCGCCCGG CACGCGACCG CCTCCGCACG CGCCGCGCGC GAGCGGTCGG CGCCCGCCCT GCCCGCGCCG TTGACGTCGT TCGTCGGCCG GGTCCGCGAG CGCCGGGAAC TGGCCGGGGC TGTGACGTCG CACCGGCTGG TGACCGTGGT CGGGCCGGGC GGGGTGGGCA AGACGCGCCT GTCCCTGGCC GTGGCGGCGG ACGTGGCCGA CGACTTCGCC GACGGGGTGT GGTTCGTCGA CCTGGTCCCG GTCACCGAAC CGGGCCGCGT GGGGGCCGCG GTCGCGGCGG CCGTGGGTGT GGGCGAGCAG CCCGGAAGCG GCGTCGACGA CACGGTCCTT GCCGCGCTGG CGGACCGCCG GGCCCTGCTG GTCCTGGACA ACTGCGAACA CGTGCGCGAC GGGGTGACGC CGTTCCTGGA GCGGCTGCTG GCGGCCTGCC CGCGGCTGCG GGTGCTCGTG ACGAGCCGGG CCCGGCTGAT GGTGCCGTTC GAGCGTGTCC TCCCGGTCCC GCCGCTGTCG CGGGACGGCG GCGAGGAGTC GGACGCGGTG GCCCTGTTCA TGGACCGGGC GGCCGTGGGC GGCTGGCCGC AGGGGCCCGC CGCGAGCGAG GAGGTCGTGG CCGTCTGCGA ACGGCTCGGC GGCATGGCGC TGGCCATCGA ACTGGCGGCG GCGCGGTGCT CGACGCTGGG GCTGGACGGA CTCGCCGCCG GGCTCTCCGA CCAGCTGCGG GTCCTCACCG GCGGTTCCCG GGCCGACGAC AGGCACCGGT CGGTGCGGGC GGTGCTGGAC TGGAGCCACG ACCTGTTGGA GCCGGGGGAC CGGGCCCTGC TGCGCCGGGT GTCGTTGTTC GTCGCGCCGT TCACCCCCGA GGCCGCCGCC GGGGTCGCCG GGTTCGCCCC GCTGGATCCG GCCTCGGTCG TCGACGGGCT CGGCAGACTC GCCGAGCACA GCCTGCTCTC CGTGACACCG TCCGCGACCG GCACCCGCTA CCACGCGCTG GAGACCATCC GCCAGTACGG GGCGGAGCGG CTCGCCGACA CCGGCGAGCT GACGCGCGTC CGCTCCCGGC ACCTGGACTG GTGCCTGGCC GGTGCGGCCG CCCTCACCGC GACCGCGGGC GCGGACTGGC GCGCCCGCTT CGACGCCGTG GCGGAGGACA TGCGGGCCGC CCTCACCTGG GCCTGCGACC AGCCCGAACA GCGCGCGGAC GCCCACCGGC TCGCCCGCGC CGTGGCCGAG CTGTCCTTCA CCCGCACCCT GCTCGGCGAG GCCCAGCAGC GGTTCGAGCA GGCGGCGCGG CTCGCCGACA CCGGCGCCGT CGCCGACGCG CTGCGCCAGG CCGCCGCGGT GGCCGGATGC CGCGGCCTCG ACGACGACAT GTACCGCCTG CACCGTGCCG CCGCGCACGC CGCCCTCCGG GCCGGGGACA CCGCGGGCGC GGGCCGCGAC CTGGCGGCCG CCGCCACCGT CGCGTACCGG TTCTCCAGCT CGTTCACGCG GCTTCCCGCC GTGGAGGAGG TGAGGGACAC GCTCGCGCGG GCGCGGGAGC TGTCCGGCGA CGCCCCGGCC GCCCGGGCCG CCGTCGCGCT GGCCGAGGCG GCGGTGGTCG CGGACGCGTT CGGCGCGGTC CAGGGGGATC CGGACAACAC CGCCGGGGAG ACGGTCGAGA GCGCCGAACG GGCGGTCGCG CTCGCCCGTG GCGCGGGCGA CCCGGTGGCC GAGTCCGCCG CCCTGGACGC GCTCTCGGGC GCCCAGAGCT GGGCCGGGAA CGCCTTCGCC GGTGCGGCCG CCTCCCGGCG CAGGGTCGAC ATCCTGGCCC CGCGACCGCC GACCCCCGCC AGCACGCACG AGCTGATGGA CGCCCTGGCC ATGGCCGCCG GAACCTCCCT CGGCGTGGGG CGGCTGCCGG AGGCCCGCCG GTGGGGCAGG CAGCTCGCCG ACCACCCGCT GCTGGCCGAG GCGGGCCACA GCGCCACGTC CTGGCTCCTG GTCGCGGACG CGTTCAGCGG CGACGTCGAC GGGGTGCTCA CCGGCAGCAC GAGGTTCCTC GACGCGTGGG AGCAGAACGG CCGACCGCGG ACGCGCTCCC TGGGGCCCGC CGCCGCGTCG GTCGCGATGG TCCACGGCCT GCGCGGCGAC CACGATGCAC GGGCGGACTG GCTCGCGATC GTCGACCGGG CCGGGTCCGA GGCCGACCAC CGCCTGGGCT ACGGCGCGGT CTTCGACACC ATGGTCCTGC TCCACCACGG GGACGCGGAG TCCGCCCTGG AACGCGTCGA ACCGGAGCCG GACCGGGTGT GGAAGTGGGT GTGCTGGGTC TGGCTCCACT GGTACGTGGC GCTCAGGGCG GAGGCGGCGG TGCTCGCCGG GCACCCCAAG GCCCGGGAGC GGATCGCCTC CGCCAGGGCC GTGGTCACCG GCAACACGGT CGCCGGTGCC CAGGTGGACC GCGCGGAGGC GCTGCTCGAC GGCGACCCGG CGGGGCAGCT CGCCGCCGCC GCGGCGTTCG ACGCGGCCGG TTGCCGCTAC CAGGCGGCGC GCACGCTGGT GCTCGCCGGG GGTGAGCACG CCGCCGCCGG CGGGGCCGCG CTCACCGGCC TCGGCCTCAC GCCCGGCCGG TGA
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Protein sequence | MPATETTTHN ESVSSPVVSA REAEVLALLG EHLSNAEIAA RLVLSVRTVE SHVSSLLRKL ALPDRRALAR HATASARAAR ERSAPALPAP LTSFVGRVRE RRELAGAVTS HRLVTVVGPG GVGKTRLSLA VAADVADDFA DGVWFVDLVP VTEPGRVGAA VAAAVGVGEQ PGSGVDDTVL AALADRRALL VLDNCEHVRD GVTPFLERLL AACPRLRVLV TSRARLMVPF ERVLPVPPLS RDGGEESDAV ALFMDRAAVG GWPQGPAASE EVVAVCERLG GMALAIELAA ARCSTLGLDG LAAGLSDQLR VLTGGSRADD RHRSVRAVLD WSHDLLEPGD RALLRRVSLF VAPFTPEAAA GVAGFAPLDP ASVVDGLGRL AEHSLLSVTP SATGTRYHAL ETIRQYGAER LADTGELTRV RSRHLDWCLA GAAALTATAG ADWRARFDAV AEDMRAALTW ACDQPEQRAD AHRLARAVAE LSFTRTLLGE AQQRFEQAAR LADTGAVADA LRQAAAVAGC RGLDDDMYRL HRAAAHAALR AGDTAGAGRD LAAAATVAYR FSSSFTRLPA VEEVRDTLAR ARELSGDAPA ARAAVALAEA AVVADAFGAV QGDPDNTAGE TVESAERAVA LARGAGDPVA ESAALDALSG AQSWAGNAFA GAAASRRRVD ILAPRPPTPA STHELMDALA MAAGTSLGVG RLPEARRWGR QLADHPLLAE AGHSATSWLL VADAFSGDVD GVLTGSTRFL DAWEQNGRPR TRSLGPAAAS VAMVHGLRGD HDARADWLAI VDRAGSEADH RLGYGAVFDT MVLLHHGDAE SALERVEPEP DRVWKWVCWV WLHWYVALRA EAAVLAGHPK ARERIASARA VVTGNTVAGA QVDRAEALLD GDPAGQLAAA AAFDAAGCRY QAARTLVLAG GEHAAAGGAA LTGLGLTPGR
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