| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2067 |
|---|
| Symbol | |
|---|
| ID | 9245917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2487707 |
|---|
| End bp | 2488348 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003679999 |
|---|
| Protein GI | 297561025 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.855193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.580158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTCAA AAAACGAACC AGGCGGACAG AAGCGGTCCT TCATCGAGGA GGCCCGCAGA
GCGCAGATCA CCTCGGCGGC GGTCGAGACC ATCGCCGAGG TGGGCTACCC CAACGCCTCC
CTGGCGCGGA TCGCGCGCAC GGCCGGGATC AGCAAGGGCG TGATCTCCTA CCACTTCGCC
GGAAAGGACG AGCTCATGGA CCAGGTGGTG ACCGACGTCT ACACCGAGAT CGCCGAGTCC
GTCCTCCCCG GGATGCTGGA GCAGACCAAC GCCGCCGACA TGCTGCGGGC CCACGTGCGC
GGCGTGGCCG AGTACGCGCT GTCCCACCCC GAGCGCATGG CCACGCTGGC GCAGATCTTC
ACCCACGCGC GCAAGGCGGA CGGCTCCCCG CGCTACGGGG CGGCGGAGTC CGACGTGCTC
TACGAGTCCC TGGAGGGCCT GTACCGGTCC GGACAGGAGA GCGGCGAGTT CCGCGACTTC
GACGTGCGGG TGATGGCGGT GACCCAGCAG ACGGCTATCG ACGCGATGTT CGCCTACTGG
AGCGCCCACC CCGGCCACGA CCTCATGGCG CACGCCCGCG AGCTGGGCGA ACTGCTCGTG
CGCGCCACCC GCGCCGACCG CTCCCCACCC CCGAACGACT GA
|
|---|
| Protein sequence | MRSKNEPGGQ KRSFIEEARR AQITSAAVET IAEVGYPNAS LARIARTAGI SKGVISYHFA
GKDELMDQVV TDVYTEIAES VLPGMLEQTN AADMLRAHVR GVAEYALSHP ERMATLAQIF
THARKADGSP RYGAAESDVL YESLEGLYRS GQESGEFRDF DVRVMAVTQQ TAIDAMFAYW
SAHPGHDLMA HARELGELLV RATRADRSPP PND
|
|---|
| |