Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2028 |
Symbol | |
ID | 9245878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2448431 |
End bp | 2449015 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003679960 |
Protein GI | 297560986 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.165285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACG AGTTCGACGC GGTCCTGAGC GCGGTCGGCC CCCGGCTGCG CGCGCTGAGG CACCGCCACG GGATCACCCT GACCGCACTG TCCGAGACCA CCGGTATCGC GGTCAGCACC TTGTCGCGGC TGGAGTCGGG ACAGCGCAGA CCGGGCCTGG AACTGCTGCT GCCCCTGGCC AAGGCCTACA ACGTGCCGCT CGACGAACTC GTCGGGGCTC CGGCCAACGG CGATCCACGG GTCTACCCGC GGCCGACCGT GCGCAACGGC ATGACCGTCA TCCCGCTGTC CCGCAACCCC GGCGGGCTCC AGGCGTTCAA GCAGGTCCTC CCGGCCGGTC CCGACGACCT GGAACCCGAT CCCCGCTCGC ACGAGGGCTA CCACTGGCTG TACGTGCTCA GCGGACGGCT GCGCCTGGTG CTGGGAGACC AGGACATCGT CCTCACCGCG GGCGAGGTCG CCGAGTTCGA CACCCATCTG CCGCACTGGT TCGGCAACGC CGAGCCCCGG CCGGTCGAGT TCCTGAGCAT CCTCGGCCCG CAGGGCGAGC GTTTCCACAT CAGGGCCCGT TACCAGCCCT CATGA
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Protein sequence | MDDEFDAVLS AVGPRLRALR HRHGITLTAL SETTGIAVST LSRLESGQRR PGLELLLPLA KAYNVPLDEL VGAPANGDPR VYPRPTVRNG MTVIPLSRNP GGLQAFKQVL PAGPDDLEPD PRSHEGYHWL YVLSGRLRLV LGDQDIVLTA GEVAEFDTHL PHWFGNAEPR PVEFLSILGP QGERFHIRAR YQPS
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