Gene Ndas_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2021 
Symbol 
ID9245871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2441627 
End bp2442715 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content76% 
IMG OID 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003679953 
Protein GI297560979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTCA CCGAGGTCGG CGCCCGGGCC TTCCGGCTGC CGCTGCACCG CTCCTGGGAC 
GGGGGCGTGG ACCGCAACGA CGTCGTGGTG GTGCGGGTGG CCACCGACTC CGGGCTGGTC
GGCACGGGTT TCGCGTGGAC CCCGCTGATC GGGGCCCGGG CGGTGGCCGC GCTGGTCAAC
GACGACCTGC GGCCCGCGCT GGTGGGCGCC GAGGCCCATC CGGCCCGGTG GGACGAGCTG
CGCTGGCACC TGCGCGAGGC GGGCACCAGC GGGCTCACCC TGATGGCGCT GGCGGGGGTG
GACATCGCCC TGTGGGACCT GCGCGCCCGC GCGGCGGAGT CGAGCCTGGT GGATCTGGTG
GGTCGGCGCC GCGAGTCGGC GCCGGCCTAC GGCAGCGGGG TCAACCTGGA CTACTCCCTG
CCCGACCTGG TGGAACAGGT GCGCGGCTGG GTGGAGGCCG GGCACGTCGC CGCCAAGGTC
AAGGTCGGCT CGCCCGATCC GGCCCGGGAC GCCGAGCGGG TGGGCGCGGT GCGCGAGGTA
CTGGGCCCGG ACCGGCTGCT GATGGTGGAC GCCAACCAGC GCTGGGACGT GCCCGGGGCG
GTCCGGGCGC TGGACGCGCT GGAGGAGTTC GGCCCGCACT TCGTGGAGGA GCCCCTCCCG
GCCGAGGACC TGGAGGCGCA CGCCCGTCTG CGCGAGCGCA CGCGGGTGCC CTTCGCCGTG
GGTGAGAACC TGCGCACGGC CGCCGAGTTC GAGCGGGCCG TGGAGCTGGG GGTGTGCGAC
GTCGCCCAGC CCAACGTGGT GCGGGTGGGC GGCATCACCC CGTTCCTGCG GATCGCGGAG
TCGATGGCGC GCCGCGGCGT GCCGGTGGCT CCGCACCTGT TGCCCGAGCT GTCGGGGCAG
CTGGCGCTGT GCCTGCCCCG GGTGGCCATG GTCGAGGACA TCGACCGGGC CTCCTTCGCC
GCGCTGGGAG CGTTGGCCCG CCCCAGCGGG GTGGAGTTCG ACCGGGGCCG GGTGCGCGCC
GACACCGGCC ACGGCCACGG CCTGGTGTTC GCCGACACGC TCACACCGGT CGCGGACGCT
TCCCCCTAG
 
Protein sequence
MRVTEVGARA FRLPLHRSWD GGVDRNDVVV VRVATDSGLV GTGFAWTPLI GARAVAALVN 
DDLRPALVGA EAHPARWDEL RWHLREAGTS GLTLMALAGV DIALWDLRAR AAESSLVDLV
GRRRESAPAY GSGVNLDYSL PDLVEQVRGW VEAGHVAAKV KVGSPDPARD AERVGAVREV
LGPDRLLMVD ANQRWDVPGA VRALDALEEF GPHFVEEPLP AEDLEAHARL RERTRVPFAV
GENLRTAAEF ERAVELGVCD VAQPNVVRVG GITPFLRIAE SMARRGVPVA PHLLPELSGQ
LALCLPRVAM VEDIDRASFA ALGALARPSG VEFDRGRVRA DTGHGHGLVF ADTLTPVADA
SP