Gene Ndas_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2020 
Symbol 
ID9245870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2440719 
End bp2441624 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content74% 
IMG OID 
Productdihydrodipicolinate synthetase 
Protein accessionYP_003679952 
Protein GI297560978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.874189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCG ACGGAATCCT CTTCTTCCCC CTGACCCCCT TCGACTCCGA AGGCGAAGTG 
AACGAGGACG TGCTGGCCGA GCACGTCGCC TCGGGCGTGG AGCACGGCGC GGGCGGGGTG
TTCGCGGCCT GCGGCACCGG TGAGGTGCAC GCCCTGTCGG CCGCCGAGCA CGCCGCGGTG
GTGCGGCGGT CGGTGGAGGT CACCGCGGGC CGCGTGCCGG TGGTGGCCGG TGCGGGCGGC
AGCGTGGGCA CCGCCATCGA GCAGGCCCGC GCGGCCCGCG AACTGGGCGC GGACGCGATC
CTGCTGCTGC CGCCCTACCT GGTGGGCGCG CCGCAGTCGG GGCTGGTGGA CTACGTGCGC
ACCGTGGTCG CGGCCTCCGA CATCCCGGTC GTGGTCTACC AGCGCGGGTC GATGGTGTTC
ACCCCCCAGA GCGCGGCGGA GCTGGCCGCG ATCCCGCAGG TGGTGGGGAT CAAGGACGGG
GTGGGCGACC TGGGCCGGAT GCACCAGATC GTGATGGCGG TGCGCGACCT GCGCGGCGAG
GAGTTCACCT TCTTCAACGG CCTGCCCACG GCGGAGCTGA CCGTGGCGGC CTACCGGTCG
GTGGGCGTGC CGCTGTACTC CTCGGCGGCG TTCGCGTTCG TGCCCGAGGT GGCCGACGCC
TTCTACCGCG CCTTCCACTC CGGCGACGCG CTGGCCGACA CCCTGATGCG CGAGTTCTTC
GAGCCGCTGG TGCGGCTGCG CGACCGGACT CCGGGGTACG CGGTGTCGCT GGTCAAGGCG
GGCGCGCGGC TGCGCGGGGT GGACATGGGC GGGGTGCGCG CGCCGTTCCG CGACCCCACC
GCCGAGGAGG AGTCCGCGCT GGCCGAGCTG ATCGAGACCG GCCTGTCCCT GGTCAAGGAG
GGCTGA
 
Protein sequence
MNFDGILFFP LTPFDSEGEV NEDVLAEHVA SGVEHGAGGV FAACGTGEVH ALSAAEHAAV 
VRRSVEVTAG RVPVVAGAGG SVGTAIEQAR AARELGADAI LLLPPYLVGA PQSGLVDYVR
TVVAASDIPV VVYQRGSMVF TPQSAAELAA IPQVVGIKDG VGDLGRMHQI VMAVRDLRGE
EFTFFNGLPT AELTVAAYRS VGVPLYSSAA FAFVPEVADA FYRAFHSGDA LADTLMREFF
EPLVRLRDRT PGYAVSLVKA GARLRGVDMG GVRAPFRDPT AEEESALAEL IETGLSLVKE
G