Gene Ndas_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2016 
Symbol 
ID9245866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp2436030 
End bp2437061 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content76% 
IMG OID 
ProductPirin domain protein 
Protein accessionYP_003679948 
Protein GI297560974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.656131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAATC TGGACACCCA TCCCGCCGAA GAGCGCGTCT GCGGCGGAGA GGTCGACCCC 
GCCGACACCG CCGCCTCCGG CGACACCGAA CTCCTCGAAC CGCGCGAGGT CCCGCTCGGC 
GGCCCGCGCG CCATGCTGGT CCGCCGCGCC CTGCCCGGGA AGAACCGCCG CATGGTCGGC 
GCGTGGTGCT TCGCCGACGT CTACGGACCC ACCGGCGTCG CCGACGGCCC CGGCATGCAG 
GTGCCGCCGC ACCCCCACAT CGGCCTGCAG ACCGTGAGCT GGCTGGTCCG GGGGTCGGTC 
CACCACATGG ACGGACTGGG CTCGGACCAG CTGGTCCGCC CCGGCCAACT CAACCTCATG 
ACCGCCGGAC ACGGCATCGC CCACTCCGAG CGCTCCCCCG CCGACGCCCC GCCGCTGCTG 
CACGGCGCCC AGCTGTGGAT CGCCCTGCCC GAGGACGACC GCGAGGGACC GGCCCGCTTC 
GAACACCACG CCGACCTGCC CGCCTTCGAC CTGCCCGGCA CGGACGCGCC GGGGGCCAGG 
GTCACGGTGA TCGCCGGAGA GGTGGACGGC CGCCGCTCCC CCGCCCGCGT GCACACCCCG 
CTCATGGGAG CCGAGGTCGT GCTGGAACCC GGGGCCCGGG TGCGCCTGCC CCTGGACGCG 
TCCTTCGAAC ACGGCGTCCT GCCCCTGGAC TCGCCCGTGC GGGTCCTGGG CCACACCGTC 
GAGGCCGGTG CGCTGCTCTA CGCGGGCGAG GGGCGCACGG AGGTGGAACT GCGGGCCGAG 
GAGACCGCGC ACGTGCTGGT GATCGGCGGC GAGCCCTTCA CCGAGGACCT GGTCATGTGG 
TGGAACTTCG TCGGCCGCGA CCACGACGAG ATCGTGCGGG CCCGCCGCGC CTGGGAGGAC 
GACCGGGAGG ACGCCGACGA CGCGGGCGGG CGGCGCTTCG CCGCGGTCGC GACCGACGAC 
GGAGCACCCC TCCCGGCTCC GGAGCTGCCC AACGCGCGCC TGCGCGCGCG CCCGCGCCAC 
CGCGGCGCGT AG
 
Protein sequence
MSNLDTHPAE ERVCGGEVDP ADTAASGDTE LLEPREVPLG GPRAMLVRRA LPGKNRRMVG 
AWCFADVYGP TGVADGPGMQ VPPHPHIGLQ TVSWLVRGSV HHMDGLGSDQ LVRPGQLNLM 
TAGHGIAHSE RSPADAPPLL HGAQLWIALP EDDREGPARF EHHADLPAFD LPGTDAPGAR 
VTVIAGEVDG RRSPARVHTP LMGAEVVLEP GARVRLPLDA SFEHGVLPLD SPVRVLGHTV 
EAGALLYAGE GRTEVELRAE ETAHVLVIGG EPFTEDLVMW WNFVGRDHDE IVRARRAWED 
DREDADDAGG RRFAAVATDD GAPLPAPELP NARLRARPRH RGA