| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2013 |
|---|
| Symbol | |
|---|
| ID | 9245863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2433391 |
|---|
| End bp | 2433936 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | intracellular protease, PfpI family |
|---|
| Protein accession | YP_003679945 |
|---|
| Protein GI | 297560971 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA CGCTCAACGG CCGTCGGGTC GCGATTCTGG CCGCGGACGG GGTCGAGCAG
GTCGAACTCG TCACACCGCG CAAGGCGCTG AGCGAGGAGG GCGCCACCAT CGACCTGGTC
TCGCTCAAGT CCGGGCGGAT CCAGGCGATG AACGGCGACA TCGAACCGGC GGACACCTTC
GACGTGGACC GCGTGGTGTC CGAGGTGGGG GTGGACGACT ACGACGCCCT GGTGGTCCCC
GGCGGGACCG TCAACCCGGA CAACCTGCGC TCGGACGAGA ACGCGGTGGG GTTCGTGCGC
GACTTCGTGG CCGCGGGCAA GCCCGTGGCC GCCATCTGCC ACGGGCCGTG GATCCTGGTG
GAGGCCGACG TGGTGCGGGG GCGCACGGTG ACCTCCTACC CCAGCCTGCG CACCGACATC
CGCAACGCGG GCGGGACCGT GGTGGAGGAG GAGGTGGTCA CCGACCAGGG GATCACCACC
AGCCGCAACC CCGACGACCT GCCCGCCTTC TGCGAGCGCA TCGTCCGCGA GTTCGCCGCG
AAGTAG
|
|---|
| Protein sequence | MADTLNGRRV AILAADGVEQ VELVTPRKAL SEEGATIDLV SLKSGRIQAM NGDIEPADTF
DVDRVVSEVG VDDYDALVVP GGTVNPDNLR SDENAVGFVR DFVAAGKPVA AICHGPWILV
EADVVRGRTV TSYPSLRTDI RNAGGTVVEE EVVTDQGITT SRNPDDLPAF CERIVREFAA
K
|
|---|
| |