Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1988 |
Symbol | |
ID | 9245838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2409763 |
End bp | 2410470 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | transcriptional regulator, ArsR family |
Protein accession | YP_003679920 |
Protein GI | 297560946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.433498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000545084 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACGCTC CCGACGCCAC CCGCCTGGCC GCCCTGGCCG CCCTGCTGGC CGACCCCACC CGCGCCGGGG TGTGCCTGGC GCTGCTGGAC GGGCGCGCCT GGACCGCCGG GGAGCTGGCC CGCCACACCG GTGTGGGTGC CTCCACCGTC AGCGAGCACC TGACCCGGCT GGTCGAGGGC GGTCTGCTCG CCCAGGAACG CCAGGGCCGC CACCGCTACG TGCGCCTGGC CGACGAGGCG GTGGCGCATC TGGTGGAGGC CCTGGCCGCG CACGCCGACC CGGGCCCGGC CCACCAGCGC CCGCGCACCC TGCGCACCGT GCACGCCGAC CGGGCCCTGG CGCGGGCGCG CACCTGCTAC GACCACCTGG CCGGAGGGCT GGGCTGCGCC GTCACCCGGG CCATGACGGG GCGGGGCCTG CTGACCCAGG ACACGGGGTT CGCGCTCACC GAGGCCGGGG TGGCCTGGTT CGCCGAGCAG CGGATACCGC TGGCGCGCGG GGGAAAGCGC CCGCTGGTGC GCTCGTGCCT GGACTGGACC GAACGCCTGC CGCACCTGGC CGGAACGGCC GGGGCGGCGC TGTGCCGCCA CGCGCTGGAC GCGGGGTGGT GCGCGCGCGT GGGTTCGGGG AGGGCGTTGC GGATCACCGA GCGGGGTGAG CGGGCCTGGT ATGAACTCCT GGGGGTGCGG GCCGCCGCGC TCGGCTGA
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Protein sequence | MHAPDATRLA ALAALLADPT RAGVCLALLD GRAWTAGELA RHTGVGASTV SEHLTRLVEG GLLAQERQGR HRYVRLADEA VAHLVEALAA HADPGPAHQR PRTLRTVHAD RALARARTCY DHLAGGLGCA VTRAMTGRGL LTQDTGFALT EAGVAWFAEQ RIPLARGGKR PLVRSCLDWT ERLPHLAGTA GAALCRHALD AGWCARVGSG RALRITERGE RAWYELLGVR AAALG
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