Gene Ndas_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1988 
Symbol 
ID9245838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2409763 
End bp2410470 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content78% 
IMG OID 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_003679920 
Protein GI297560946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.433498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000545084 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGCTC CCGACGCCAC CCGCCTGGCC GCCCTGGCCG CCCTGCTGGC CGACCCCACC 
CGCGCCGGGG TGTGCCTGGC GCTGCTGGAC GGGCGCGCCT GGACCGCCGG GGAGCTGGCC
CGCCACACCG GTGTGGGTGC CTCCACCGTC AGCGAGCACC TGACCCGGCT GGTCGAGGGC
GGTCTGCTCG CCCAGGAACG CCAGGGCCGC CACCGCTACG TGCGCCTGGC CGACGAGGCG
GTGGCGCATC TGGTGGAGGC CCTGGCCGCG CACGCCGACC CGGGCCCGGC CCACCAGCGC
CCGCGCACCC TGCGCACCGT GCACGCCGAC CGGGCCCTGG CGCGGGCGCG CACCTGCTAC
GACCACCTGG CCGGAGGGCT GGGCTGCGCC GTCACCCGGG CCATGACGGG GCGGGGCCTG
CTGACCCAGG ACACGGGGTT CGCGCTCACC GAGGCCGGGG TGGCCTGGTT CGCCGAGCAG
CGGATACCGC TGGCGCGCGG GGGAAAGCGC CCGCTGGTGC GCTCGTGCCT GGACTGGACC
GAACGCCTGC CGCACCTGGC CGGAACGGCC GGGGCGGCGC TGTGCCGCCA CGCGCTGGAC
GCGGGGTGGT GCGCGCGCGT GGGTTCGGGG AGGGCGTTGC GGATCACCGA GCGGGGTGAG
CGGGCCTGGT ATGAACTCCT GGGGGTGCGG GCCGCCGCGC TCGGCTGA
 
Protein sequence
MHAPDATRLA ALAALLADPT RAGVCLALLD GRAWTAGELA RHTGVGASTV SEHLTRLVEG 
GLLAQERQGR HRYVRLADEA VAHLVEALAA HADPGPAHQR PRTLRTVHAD RALARARTCY
DHLAGGLGCA VTRAMTGRGL LTQDTGFALT EAGVAWFAEQ RIPLARGGKR PLVRSCLDWT
ERLPHLAGTA GAALCRHALD AGWCARVGSG RALRITERGE RAWYELLGVR AAALG