Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1982 |
Symbol | |
ID | 9245832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2404057 |
End bp | 2404686 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003679914 |
Protein GI | 297560940 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.142001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000322137 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACCAC CTGACACCCG CACCCAGATC CTCGACGCGG CCGAGCGCCT CTTCGCCGAG CGCGGCTACC GCGGCACCTC GGTCCGCGCG ATCACCGACC TCGCCGGAGC GAACCTGGCC GCCGTCGGGT ACCACTTCGG GTCGAAGGCG GAACTCATGT CCGCGGTCGC CCGCCGGGTG GTCGAGCCCA TCAACGCCGC GCAGTGCGCC GGGCTCGACC GGCTACTCGC CGAGACCGCG GACCCCGGGG TCACCGAGCT GGTGGAGGCG TTCGCGGGGC CGCTGTTCGA CGGGATGCCG GCCGGCGACG AGGGCGGCGC CCGCCGGTCC CGGCTGATCG TGATGATCCT CAGCGACCCG GCCGAGGAGG TGCGCAGCTG GGCCGGTGCG GGTCAGGACA CGGTCCGTGA GCGCTACCTG GCCGCCTTCG CGCGCGCACT GCCCGGCCTC TCCCCGGAGG AGCTGTGGTT CCGGATGCGG GGTGTCCTCG CCGTGACGGC CGTGGACCGT GTCGAGGTCC ACCAGCGGCC CACCCCGGAC TGCCCGTCCC CGGAAGCGGG CGAGGCGGCC CGGCGCTGGG CGGTCACGTT CCTGGCCGCG GCGATGGGCG CACCGCCGAC GGGGCCCTGA
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Protein sequence | MAPPDTRTQI LDAAERLFAE RGYRGTSVRA ITDLAGANLA AVGYHFGSKA ELMSAVARRV VEPINAAQCA GLDRLLAETA DPGVTELVEA FAGPLFDGMP AGDEGGARRS RLIVMILSDP AEEVRSWAGA GQDTVRERYL AAFARALPGL SPEELWFRMR GVLAVTAVDR VEVHQRPTPD CPSPEAGEAA RRWAVTFLAA AMGAPPTGP
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