| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1959 |
|---|
| Symbol | |
|---|
| ID | 9245809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2383054 |
|---|
| End bp | 2385186 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003679892 |
|---|
| Protein GI | 297560918 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000363453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000721686 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGTC CGAGTGTCAC TCCTGGTATG TGGGCCCGGG GTCTTTCCGG GCTGAGCGAC
CTGGTGTACG GGGTGGCCAC GGAGGAGGCC CATGCGGAGG TGTTCTCCGT GCGCGGTGAG
CGCGGCCGGT GGGAGCGGGT GAAGGCCGGC GGGTTCGCCA CGGAGGTGAC GGCGGTCGCC
AAGGGTTTGG TGGCGGCCGG TGTGGGTGAG GGCGACCGGA TCGTGGTGGT GTCGGGGTCG
CATCAGGACT GGGTGCGGTT GGCGTTCGCC GTGTGGTCGG TGCGTGCGGT GTTGGTGCCG
TTGCCGGAGT CGGTGTCGGC GGAGCGTTTG ACGCATGTGG TGCGGCAGAC GCGTCCGGCG
GCTGCGGTGG TGCAGGGTGA GCGGTTGTTG CGCACGGTGT CGGGTTTGCA GCGTGAGTTG
CCGGACCTGG GTCGGGTGTG GCGGATGGAC GCGGGTCTGG CGGGTGTGGT GTCGCTGGGT
GCGTATATGG ACGCGTCGTC GGTGCGGTTT CGTCGGGACG GGGCGGTGGC CGAGGATGTG
GCGGTGGTGC TGTATCCGGT GAGTACGGTG TCGCGGTTGA CGCGGGGTGT GGTGTTGTCG
CACGGGGCGT TGTTGTCGGC TGCGGCGGAT GTGGTGGACC GGATGTGGCC GCGGTTGTCG
GAGTTGCCTG AGGGCCGGGC GAGCACGTTG TTGGATCTGC CGTTGTCGCA GATCTCGGGG
TTGGCTTCGT TGGTGGCGTG CATGGTGGGG CGTGTGCGTG TGGGGTTGGC GGGCCCGACG
GGTTTGGTGC GGCAGATGGA GGCGTTCAAG CCGACGGTGC TGGTGTGTTC GGCCCAGGTG
TTGCAGGGTG TCTTCGATGC GGAGCGGGGG AGTGCGCGTT CGACGGGGTG GGACTCGTTG
GGCACGTTCA ACGCGGCGGT GGAGTCGGCG GTGCAGTTCG ACCGGTCGCC GCGCAGGAGT
GCGTGGCAGC GGTTGTCGCG GACGATGTAT GACTGGCAGT TCTCCCGGGT GCGGGAGTTG
TTCGGTGGCC GGGTGCATCT GGCGGTGTGC TGGGGCGGTG GGCTGTCGGA CCGGTTGGAC
TCCTTCTTCG GCGGTGTGGG GATTCCGGTG GTGCAGGCGT TCGGTACGGC CGAGGCGGGG
GGTGTGTTCG CGGCCGGTGC TGTGGGGGAC CGGGTTCCGG GGACGGTGGG GCGTGCCCTG
GAGGGTCGTG AGGTGTGGGT GTCGCGTGAG GGCGAGATCC ATGTGCGCGG CGGTGCGGTG
TTCTCGGGGT ACTGGGGTGA GGGTGAGGCC TCGCGGAGTG CGTTTCGTGA GGGGTGGTTG
GCGACGGGGT ACGCGGGTGA GGTGGACGCG GACGGGGTCG TGAGTGTGGC GGGCCGGTTG
CGGGTGCAGG CGGCGACGGA GGAGTTGGCG GGGCGGTTCG TGGCGCGCGG GGCGGATGAG
GCGCCTGCGT TGGAGGGCCG TGTGCTGCCG GAGTCTGAGG GGCGTGTGCT GGAGGGTCGT
CCGGTGCAGG AGCAGCGGCG TGACTCCGAG GAGGGTGTGC GTCGGCGGGA TGCGCGTGCG
TTGGAGGGCC GCGCGTTGGA GGCTTCGGTG GAGCAGGAGC CCGGTGCGGC CTCGGATGGG
GGTTCGGGGG AGATGCTGGC GGTGACGGCG GCGTTCGCCG CGGTGGATCC GGCTGGGGGC
GGGGAGCCCG CCGTGGTGGA GCCGCAGGAC CAGCGTGTGG AGCGGGGGGA CGCGGAGCTG
GTGGCGGAGT TCGAGGCGCG GTTGCGTGCC CATCCGTTGA TCAGTCAGGT GTTGGTGATC
GTGGAGGGGC GGCCGTTCGC GAGTGCGTTG GTGACGTTGG TGCGTGACCA GTTGGAGTAC
TGGCGGTTGG TGAACGGTCG GCCGTTGGCG ATGGCGCCGG AGGAGATCGC GGGGGACCGT
GAGCTGCTGC GTGAGGTGCA GGGGTTGGTG TACGAGGCCA ATCGGAGTGT GCCTCGTCAT
CTGGCGGTGC GGTCGTTTCA TGTGTTGGCG GAGGAGTTCA CGGTGCAGTC GGGGTTGGTG
CACGCGTCGG GGGAGTTGCG GCGTGAGGCG GTGTTGCGGG CGTTCGCGGA GGAGATCGAC
GGGTTGTACC GGGTGCGGCG TGAGCAGCAG TAG
|
|---|
| Protein sequence | MGGPSVTPGM WARGLSGLSD LVYGVATEEA HAEVFSVRGE RGRWERVKAG GFATEVTAVA
KGLVAAGVGE GDRIVVVSGS HQDWVRLAFA VWSVRAVLVP LPESVSAERL THVVRQTRPA
AAVVQGERLL RTVSGLQREL PDLGRVWRMD AGLAGVVSLG AYMDASSVRF RRDGAVAEDV
AVVLYPVSTV SRLTRGVVLS HGALLSAAAD VVDRMWPRLS ELPEGRASTL LDLPLSQISG
LASLVACMVG RVRVGLAGPT GLVRQMEAFK PTVLVCSAQV LQGVFDAERG SARSTGWDSL
GTFNAAVESA VQFDRSPRRS AWQRLSRTMY DWQFSRVREL FGGRVHLAVC WGGGLSDRLD
SFFGGVGIPV VQAFGTAEAG GVFAAGAVGD RVPGTVGRAL EGREVWVSRE GEIHVRGGAV
FSGYWGEGEA SRSAFREGWL ATGYAGEVDA DGVVSVAGRL RVQAATEELA GRFVARGADE
APALEGRVLP ESEGRVLEGR PVQEQRRDSE EGVRRRDARA LEGRALEASV EQEPGAASDG
GSGEMLAVTA AFAAVDPAGG GEPAVVEPQD QRVERGDAEL VAEFEARLRA HPLISQVLVI
VEGRPFASAL VTLVRDQLEY WRLVNGRPLA MAPEEIAGDR ELLREVQGLV YEANRSVPRH
LAVRSFHVLA EEFTVQSGLV HASGELRREA VLRAFAEEID GLYRVRREQQ
|
|---|
| |