Gene Ndas_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1947 
Symbol 
ID9245797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2370918 
End bp2371844 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content75% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003679880 
Protein GI297560906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.156536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0102569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC AGCACTGGAC TCCCGCCGAC ATTCCGCCGC TCGACGGCCG GACCGCTCTG 
ATCACCGGCG CCAACAGCGG CATCGGCTAC CGCACCGCCC GGGCCCTGGC CCGGCACGGC
GCCCGTGTCC TGCTCACCGG GCGCCGTCCG GACGCGCTGG CCGAAGCCGC CGCCCGCCTG
CGCGGCGACG TGCCCGGCGC GCGTCTGGAG ACCGTGGAGC TCGACCTCGG CGACCTGGCC
GCGATCCGCG ACGCGGCGGC CCCGCTCGCC GCCGAGGAGA CGATCGACAT CCTCGTCAAC
AACGCCGGAG TCATGAACGT CCCCCAACGC CGCACCACCC GTGACGGCCT CGAACTGACC
GTCGGCACGA ACCACCTCGG CCACTTCGCG TTGACCGCCC ATCTGATGCC CGCCCTGACG
CGTTCGGCGG CCGCGCGGAT CGTCACGGTC AGCGCCATCG CCGCCACCTG GCGCTCAGGC
GACCTCACCG ACCTGATGAG CGAACAGCGC TACCGCCCGA TGGGCGCGTA CGCCAAGTCC
AAGCGCGCCA ACATCGTCTT CACCCGGGAA CTCGCCCGCC GCCTCGACGG CAGCGCGCAC
CGCGCCCTGG CCGTGCACCC GGGGTCGGCC GTCACCAACC TGCAGCGCCA CACGTCCACG
GGGCGGGCGG GGCGGCTGTT CGTCGCCCTG GCCGCGCGCA CCCTGATGGG CTCGCCCGAG
GGCGCCGCCT GGCCCTCCCT GTACGGCGCG ACCCACGCCG CGGCCGCCAA CGGCGCCTTC
CTCGGTCCCG CCGGACGGGA CCAGACCTCC GGGACCCCCG AGCCGACCCC CCTGCCCGCC
GGGGCCGACA GTCCCGAGCA GGGTTCCCGG CTGTGGCGTG AGAGCGAACG GCTGACCGGG
GTCGCGTTCC CGGTCCCGCG GACCTGA
 
Protein sequence
MTAQHWTPAD IPPLDGRTAL ITGANSGIGY RTARALARHG ARVLLTGRRP DALAEAAARL 
RGDVPGARLE TVELDLGDLA AIRDAAAPLA AEETIDILVN NAGVMNVPQR RTTRDGLELT
VGTNHLGHFA LTAHLMPALT RSAAARIVTV SAIAATWRSG DLTDLMSEQR YRPMGAYAKS
KRANIVFTRE LARRLDGSAH RALAVHPGSA VTNLQRHTST GRAGRLFVAL AARTLMGSPE
GAAWPSLYGA THAAAANGAF LGPAGRDQTS GTPEPTPLPA GADSPEQGSR LWRESERLTG
VAFPVPRT