Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1945 |
Symbol | |
ID | 9245795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2368778 |
End bp | 2370049 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | amino acid permease-associated region |
Protein accession | YP_003679878 |
Protein GI | 297560904 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0388376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.012514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCACCT CCTCCTCCGG CCCCCAGGCC AGACCCGCCC GCGTCCTGGG CACCGTCGAC GCCGTCGCCA TCGGCGCGGG CGCGATGCTC GGCGCCGGGG TGTTCACCGT CTTCGCCCCG GCCGCGCTCG GCGCGGGCGC CTGGCTGCCC GTGGCCATCC TCATCGCGGG GATCGTCGCC TACTGCAACG CCGTCTCCTC GGCCAGGCTC GCCGCCCGCC ACCCCGAGTC CGGCGGCGCC TACGTCTACG GCCGCGAGCG CCTGGGCGAC CTGTGGGGCT ACCTGGCGGG CTGGTCCTTC GTGGTCGGCA AGACCGCCTC CTGCGCGGCC ATGGCGCTGA CCTTCGGCGC CTACCTCCTC CCCGGCTGGG AGAAGGCCCT GGCGGCGGCC ACCGTGGTCG CGCTCACCGC GCTCAACTAC CGCGGGATCC AGCGCTCCAC GATGGTGATC AAGATCCTGC TGGCCGCGGT CCTGGCCGTC CTGGCCGCCG TGTGCGTTGC CATGCTCCTC AGCGGGCGCC TGGCCGCCGT CGCCCAGGTG GAGGGCCTGG GGCCCTGGCC CGGCTCCTTC GGTGTGCTCG GCGCGGCCGG GATGATCTTC TTCGCCTTCG CCGGGTACGC CAGGGTGGCC ACCCTGGGCG GCGAGGTCCG CGACCCCCAG ACCACGATCC CCCGCGCGGT CAACATCTCC CTGGGCGGCG TGCTGGCGCT CTACCTCGTC ATCGGCACCG GACTGCTGAT CGTGCTGGGC CGCGAGCGCC TGTCCACCAC CGACACCCCG ATGGTCGACG CCGTCCGGGT GGCCGGGTTC GACTGGCTGG CCCCCGTGGT GGTCGCGGGC GCGGCCGTGG CCAGCCTGGG GGCCCTGCTC TCCCTCATCC TCGGGGTCTC GCGCACCACC GCCGCGATGG CCGCCGACGG ACACCTGCCC CGCTCCCTGG CCTCGGTCCA CGAGCGCCAC GGGGTGCCCC ACCGCGCCGA GCTGCTGGTC GGCGCCGTCG TCATCGCCCT GGTCCTGGTC ACCGACCTGC GCGGCGCGAT CGCCTTCTCC GCCTTCGGAG TGCTGGTCTA CTACGCCATC ACCAACGCCT CGGCGCTGCG CCTGGGTCCC GACGAGCCCC GCCCGCCGCT GCTGGTGCCG CTGACCGGGC TGGGCGGCTG CGTCGTGCTG GCGTGCAGCC TGCCGCTGCC CACGGTCATC ACCGGCATGG CGGTCCTGGC GGTGGGAGCC GGGCTGTGGT GGCTGCGCGA GCGCTTCGAC CTGCGCTTCT AG
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Protein sequence | MTTSSSGPQA RPARVLGTVD AVAIGAGAML GAGVFTVFAP AALGAGAWLP VAILIAGIVA YCNAVSSARL AARHPESGGA YVYGRERLGD LWGYLAGWSF VVGKTASCAA MALTFGAYLL PGWEKALAAA TVVALTALNY RGIQRSTMVI KILLAAVLAV LAAVCVAMLL SGRLAAVAQV EGLGPWPGSF GVLGAAGMIF FAFAGYARVA TLGGEVRDPQ TTIPRAVNIS LGGVLALYLV IGTGLLIVLG RERLSTTDTP MVDAVRVAGF DWLAPVVVAG AAVASLGALL SLILGVSRTT AAMAADGHLP RSLASVHERH GVPHRAELLV GAVVIALVLV TDLRGAIAFS AFGVLVYYAI TNASALRLGP DEPRPPLLVP LTGLGGCVVL ACSLPLPTVI TGMAVLAVGA GLWWLRERFD LRF
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