Gene Ndas_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1925 
Symbol 
ID9245775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2345159 
End bp2346181 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003679858 
Protein GI297560884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.664507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCG TCGTCGAACT CGACCGCGTC ACCCACCGCT TCGGCGGACG CAAGGGCAAG 
GACGGCCCCG CCGCCGTCGC CGACCTGGAC CTGGCCGTGC AGCGCGGCAG GTTCACCACG
CTGCTGGGCC CCAGCGGCTG CGGCAAGACC ACCACCCTGC GCATGATCGC CGGGTTCCTC
CAGCCCACCT CCGGCAGGAT CCTGCTGGAG GGGGAGGACG CCACCCGCAC CCCGCCGGAG
AAGCGCAACA TCGGCATGGT CTTCCAGTCC TACGCGCTCT TCCCGCACAT GACCCTGCGC
GACAACGTCG GCTACGGGCT GCGCACCCGC AGGATCGCCG CCCAGGAGGT GGCCAGGCGC
GCGGGTGAGG CGCTGGACCT GGTGGGCCTG GCGCACCTGG CCGACCGCAA GCCCGCCGAG
CTGTCCGGCG GCCAGCAGCA GCGGGTGGCC CTGGCCCGCG CCGTGGCCAT CCGACCCTCG
GTGCTGCTGC TGGACGAGCC GCTGTCCAAC CTCGACGCCC AGCTGCGCGT GCAGATGCGC
CGCGAACTGC TGCGGGTCCA GCGCGAGACC GGGCTGACCG CCGTCCTGGT CACCCACGAC
CAGGACGAGG CGCTGGAGCT GTCCGACACC ATGGTCATCC TCAACGAGGG GCGCCTGGAG
CAGCAGGGCG CGCCCCGGGA GGTCTTCCCC GCGCCCGCCA ACCGCTTCGT CGCCGAGTTC
CTGGGCTACG ACAACTTCCC GCGGGTGCCC GGGCACGGAG CCGTCACCAT CCGGCCCGAA
CACGTGCGCC TGCTGCCCGC CGGAACCCGC GAGGGCGAGG GCGAGACCGG CCTGGGCGGC
ACCGTCGGCG AGGTCACCTT CCAGGGCAGC AACTGCCTGG TCGAGGCCCG CATCGACGGC
GTGGAGGGGC CCGGGTCGGT CCTGCGCTCC CTGCACCCGG CCGACGACCT GCGTCCCGGC
GACCCCGTGC GTATCGCCCT GCCCCACCGC CACCTGGTGG AACTCGCCGA GGAGACCGGA
TGA
 
Protein sequence
MTPVVELDRV THRFGGRKGK DGPAAVADLD LAVQRGRFTT LLGPSGCGKT TTLRMIAGFL 
QPTSGRILLE GEDATRTPPE KRNIGMVFQS YALFPHMTLR DNVGYGLRTR RIAAQEVARR
AGEALDLVGL AHLADRKPAE LSGGQQQRVA LARAVAIRPS VLLLDEPLSN LDAQLRVQMR
RELLRVQRET GLTAVLVTHD QDEALELSDT MVILNEGRLE QQGAPREVFP APANRFVAEF
LGYDNFPRVP GHGAVTIRPE HVRLLPAGTR EGEGETGLGG TVGEVTFQGS NCLVEARIDG
VEGPGSVLRS LHPADDLRPG DPVRIALPHR HLVELAEETG