| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1890 |
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| Symbol | |
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| ID | 9245740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 2304676 |
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| End bp | 2307465 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003679824 |
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| Protein GI | 297560850 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.506714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.719008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGAGC ACACAGGCGG CCCCGGTGCG GTCATGTGGC CGGACCCGGA TCCGGTGGAA
CCGATCGTCG GCCGGGACAC GGAGTTGGCG CGCCTCTTCC GCGCGGTGGA CTCGACGTCG
ACCGACCGGG TCCTGGTGCT GGTCGGCGAC CCGGGCACGG GCAAGAGCGC GCTGCTGGGC
TCCGCGGCGC GCCGAGCCGA AGCGGGCGGC GCCCGCGTCC TGCGCGCCGA GGGGAGCGAG
TCGGAGTCGG GCCTGGCGTT CTCCGCGCTG CACCAGTTGC TGAGGCCGGT CTCGGCCCGG
GTGGACGCGC TGCCGGAGAG GCAGCGCACG GCGGTGCGCG ACGCCTTCGG CGCGGGGTCG
GCCACGGCGG AGCCCGACCC CATGCTCATC GGGGTCGCCG TCCTGAGTCT GCTCTCGGCC
CTGGGCGACC GGCGTCCCGT GCTCGTGGTG CTCGACGACG CGCAGTGGTT CGACCGCGCT
TCCCTGGACG TGCTGTCCTT CGCCGCCAGA CGGCTGGAGG GCGAACCGGT GACGATGCTG
TTCGGGGTCC GCGCCGGCGA CCGCCTGCCG GGGCTCGACC GCCACCTGCC GACGCTCGCG
CTGGGAGCGC TCGGCGACGC CGCCGCCAAC CGGCTGCTGG ACTTGCAGCC GGGCAGCCCC
GTCGGCCGGG TCAGAGCGCG GATCCTCGAC CAGGCCGGCG GCAACCCGCT GGCGCTGACC
GAACTGACGA GGGCGTCCGC CGCGCACGAC GCGGCCGCGG GGCCGCCCTC CCCGGGTCCG
CTCCCGCTCA CCGATCACCT GGAGGGGGTC TTCGCGGCCC GTCTGAACGA CCTCCCCGCC
GCCAGCGGGC AGGCCCTGCT GCTCCTGGCC GCCATGGACA GCGTCGACTC CGCGGTCGTC
GCCTCCGTCG GGCTGCCGCA CGCCGGGGAC GACGCGTGGC TGCCCGCCGA ACGGGCCGGG
CTGGTCCGGC GGACCGGTCG GGGCGTCCGG TTCCGCCACC CTCTGGCCCG GTCCGCCACG
TACCACGCCG CCTCCCCCGC CTCACAGCGC GAGGCCCACC TCGCACTCGC CGGGATACTG
CGGGACGAAC CGGATCGGCG TGCCTGGCAC CTCGCCGCCG CCTGCTTAGG CCCCGACGCG
GCCGTGTCGG CGGAGTTGGA GCGGACCGCC GACCGGGCCC GCCGCCGCGG CGGCCACGCG
GCGGCGGCCA GTGCCCTGCG ACGCGCCGCC GAACTCGCAC CGCGGCGCGA GGACAGGGCC
AGGCTGCTGG TCGAAGCGGC CTCGGCGGCC GTGTTCACCG GCGACATCTC CTGGGTCGAG
GAACTGGCCG CCGAGGCACG CGCGCACACC GAGGACCCAT CGCTCCTGGC ATCCGTCACC
GCGCAGGTCG GACGGCTGGC GGTGCTGACC GTGCGCCACA CCGTGGTCTT CTCCCGACTG
GTCCGTTCCG CCGAGCAGGC GGCGGTCTCG CGGCCCGCCA CCGCGCTGGA CCTGCTGGCC
GATGCCGCCG TGGTCCGCTT CTACTCCGGG GAGGACGCCC AACGGCGCCG GATCCGGGCC
GTCCTGGAGC GACTCCCCGG GGACGCGTCA CACGCATGGC CACGCGCCTG GGTGAGGGCC
GTGTCGGACC CCTTCGAGGG CAGGGCCGAA CTCCTCTCCC TGCTTCCTCG GTTGGTCTGC
GAGGCGGAGC GCCAGCCCGA CCGGCTCACC GCTCTCGCGG TCATGGCGTG GCTCCTGGAC
GAGACCCCGC AGGCCGTCCG CGCCTTCGAC GAGGCGTTCG ACCGCTGGAA GTCGCAGGGG
CCGCTTCCGG AGGGCCTGGA GGGCGCTGCC GCCTGGAGCT ATGTGGAGCA GGGGCGGTGG
GATCGGGCAC GCGAGGCCTG CGCCCGCACC GCCGCCGTCG GGGCGAGGGC CGGTCTCGAC
CACGCCGTGG CGTGCGCGGC CGCGGTGGAG GCCACCGTGC TGGCCTACCA GGGGGACACG
GCGGCGGCCC GGGACCGGGT CGGGGACGTG TTCGCCCTGA TCGATCCGAT GGAGAGCCGC
TCCGTGTCCG TCTACGCCCG TCGCGCGCTC GGTGCCGCGG CGGTCGCGGA AGGCGGGTAC
GAGGACGCGT ACGACCAACT CCGCACGGTC TTCACCTCGG ACGGCGCCCC GGTGCACTAC
CACGCCTCCT ACCCGGCCCT CGCGGACCTG GCAGCCGCCG CCGCGCGCAG CGGTCGGCGC
GCGGAGGCCG CCGCGATCGT CGGGCGTTGC GCACACGCGC TCGCGGACGG CGCCTCGCCC
CGGCTGCGCG CGCTGATCAG CCGGGCCCGT GCCCTCCTGG CGGACCCCGA GGACGCCGAG
GCGCACTTCC GGGCGGCCCT GGTCGATCCT CGGCTGGAGC GCTGGCCCTT CGAGCGGGCC
CAGACCCTGC TGGACCTGGC CGAATGGTTG CGGCGCCGTC GACGCGTCAC CGAGGCGCGG
GGGCCGCTCA CCGAGGCTCT GGAGGTCTTC CGGCGGCTGG GGGCGCGCCC GTGGATCGAG
CGCGCCCGGT CCGAGTCGCG CGCCGCCGGC CTCGACGTCA CGGACGCGGC CCCCGACGCG
CTCTCCCGGC TCTCCCCGCA ACAGCAGCAG ATCATCAGGC TCGCCGCCCG CGGGCTGACC
AACCGGGAGA TCAGCGAGAA GCTCTTCCTC TCTCCGCGCA CGGTCGGCTC ACACCTCTAC
CGCAGCTTCC CCAAGTTGGG TGTCACCGCC CGCTCCCAAC TGCGCGACCT GGTCGAGAAC
GCCCTCCCGA CGACCGCTCA CCCGGGGTAG
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| Protein sequence | MGEHTGGPGA VMWPDPDPVE PIVGRDTELA RLFRAVDSTS TDRVLVLVGD PGTGKSALLG
SAARRAEAGG ARVLRAEGSE SESGLAFSAL HQLLRPVSAR VDALPERQRT AVRDAFGAGS
ATAEPDPMLI GVAVLSLLSA LGDRRPVLVV LDDAQWFDRA SLDVLSFAAR RLEGEPVTML
FGVRAGDRLP GLDRHLPTLA LGALGDAAAN RLLDLQPGSP VGRVRARILD QAGGNPLALT
ELTRASAAHD AAAGPPSPGP LPLTDHLEGV FAARLNDLPA ASGQALLLLA AMDSVDSAVV
ASVGLPHAGD DAWLPAERAG LVRRTGRGVR FRHPLARSAT YHAASPASQR EAHLALAGIL
RDEPDRRAWH LAAACLGPDA AVSAELERTA DRARRRGGHA AAASALRRAA ELAPRREDRA
RLLVEAASAA VFTGDISWVE ELAAEARAHT EDPSLLASVT AQVGRLAVLT VRHTVVFSRL
VRSAEQAAVS RPATALDLLA DAAVVRFYSG EDAQRRRIRA VLERLPGDAS HAWPRAWVRA
VSDPFEGRAE LLSLLPRLVC EAERQPDRLT ALAVMAWLLD ETPQAVRAFD EAFDRWKSQG
PLPEGLEGAA AWSYVEQGRW DRAREACART AAVGARAGLD HAVACAAAVE ATVLAYQGDT
AAARDRVGDV FALIDPMESR SVSVYARRAL GAAAVAEGGY EDAYDQLRTV FTSDGAPVHY
HASYPALADL AAAAARSGRR AEAAAIVGRC AHALADGASP RLRALISRAR ALLADPEDAE
AHFRAALVDP RLERWPFERA QTLLDLAEWL RRRRRVTEAR GPLTEALEVF RRLGARPWIE
RARSESRAAG LDVTDAAPDA LSRLSPQQQQ IIRLAARGLT NREISEKLFL SPRTVGSHLY
RSFPKLGVTA RSQLRDLVEN ALPTTAHPG
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