| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1846 |
|---|
| Symbol | |
|---|
| ID | 9245696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2253544 |
|---|
| End bp | 2255637 |
|---|
| Gene Length | 2094 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein |
|---|
| Protein accession | YP_003679780 |
|---|
| Protein GI | 297560806 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00117093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0504291 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGA CGCTGGACGC GCGGGCCATG GGCCAGCCGC TGCCCCGCCT GGAGGGCGCC
GACAAGGTCA CCGGACGGGC GCCCTACGCC TACGAGCACC CGCTCGCCGA CCCCCTGTAC
CTGCACCCGG TGCTGTCCAC CGTCGCGCGC GGGCGCGTCA CCGCGGTCGA CGCCTCCGCC
GCCGAGGCCC TGGCCGGTGT GCGCGCCGTC CTGACCCCGG ACAACGCCGA ACGCCTCGCC
GACACCGAGG ACCGCGAGTT CGCGGTGCTC CAGTCCCGCG AGGTGTCCTT CCACGGCCAG
TTCGTCGCCG CGGTCGTGGC CGACACCCCC GAGACCGCCC GCCAGGCGGC CGGACTCGTG
AAGGTGGACT ACGAGCGCTC CGAGCACGAC GTGGTGCTCA CCGCCGGCCA CCGCGGCCTC
TACCGGCCCG TGGGCGAGGA CGACGAGGGC CCCGCCTCCG ACACCGAGCA GGGCGACCCC
GACGCGGCCC TGGCCGCCGC CGAGGTCGTG GTCGACCAGA CCTACAGCAC GCCCACCGAG
CACAACAACC CCATGGAGCC GCACACCACC ACGGCCCTGT GGGAGGAGGC CACCGGCGAC
CTCACCCTCT ACGACTCCAC CCAGGGCGTG CACGTGGTCC GCGCGTCCGT GGCCGGGGTG
TTCGGGCTCG ACCCCGAACG GGTCCGGGTG GTCGCGCCCC ACGTGGGCGG CGGCTTCGGC
TCCAAGGGGG AGGCGCACGC GCACGACGTC CTGGCCGCGA TGGCCGCCCG CGCCCTGCCC
GGGCGGCCGG TCAAGTTCGC GCTGACCCGC CAGCAGATGT TCTGCCTGGT GGGCTACCGC
ACACCCACCA TCCAGCGGGT GCGCCTGGGC GCCGACCGCG ACGGGCGCCT GTCCGCGGTC
GTCCACGACT CCGTGGAGCA GACCGCCAGG ATCAAGGAGT TCACCGAGAA CAGCGCGATG
TGCTCGCGGT GGATGTACGC CGCGCCCCAC CGCCGCACCA CCCACCGGAT CGCGCCCCTG
GACGTGCCGG TCAACTTCTG GATGCGCGCC CCCGGCGAGG CCCCGGGGAT GTACGCGGCC
GAGGCCGCCA TGGACGAACT CGCCCAGGCC TGCGGCGTCG ACCCCGTCGA GCTGCGCGTG
CGCAACGAGC CCGAGACCGA CCCGCAGAGC GGTTCCCCGT GGTCGGACCG GCGCCTGGTG
CGGTGCCTGC GCGAGGGCGC CGAGCGCTTC GGCTGGCACG GGCGCGACCC CCGGCCAGGC
GTCCGCCGGG AGGGGGACTG GCTGGTGGGC ACCGGCGTGG CCTCGGCGAG CTACCCGCAC
CTGTTCAACC CCGGATCGGT GGCCCGCGTC CGCTACGGCC GGGACGGCCG TTACGAGGTG
TCCATCGGCG CGGTGGACAT CGGCACCGGG GCCTGGACCG CGCTCACCCA GATCGCCGCC
GACGCGCTGG GCCTGCCCGC CTCCGACATC CGGCTGCGCA TCGGCGACAC CGCCTTCCCG
TCGGCCTCGG TCGCGGGAGG CTCCAGCGGG ACCAGCTCCT GGGGGACGGC CATCGTGACC
GCCGCCCGGG CCTTCCGCGA CCGGCACGGG GACTCCCCGG CCCCGGGCGC GGAGGCCGAG
GGCAGCGGGG CGGAGGACAC CGTGGACGAG TCGTACTCGG TCTACTCCTT CGGGGCGCAC
TTCGCCGAGG CGCGGGTGAA CGCGGACACG GGCGAGGTCC GGGTGCCGCG CATGTACGGC
CTGTTCTCCA TCGGCCGGGT GGTCAACCCG CGCACGGCGC GCTCGCAGTT CCTCGGCGGG
ATGGTCATGG GCCTGTCGAT GGCGCTGCAC GAGGAGAGCT TCCGGGACCC GCGGTACGGC
CACATCGCCA ACGGCGACTT CGCCGAGTAC CACGTCCCCA CCAACGCCGA CGTGGGCGAC
CTGCGGGCGG AGTGGCTGGA CGAGGAGGAC CCCCGCGCCA CCCCCATGGG GTCGCGGGGC
GCGGGCGAGA TCGGCATCGT CGGGTCCGCC GCGGCGGTGG CCAACGCCGT CCACCACGCC
ACGGGGATCA GGGTGCGGGA CCTGCCGGTC ACGGCGGACA AGCTCCTGCG GTGA
|
|---|
| Protein sequence | MTGTLDARAM GQPLPRLEGA DKVTGRAPYA YEHPLADPLY LHPVLSTVAR GRVTAVDASA
AEALAGVRAV LTPDNAERLA DTEDREFAVL QSREVSFHGQ FVAAVVADTP ETARQAAGLV
KVDYERSEHD VVLTAGHRGL YRPVGEDDEG PASDTEQGDP DAALAAAEVV VDQTYSTPTE
HNNPMEPHTT TALWEEATGD LTLYDSTQGV HVVRASVAGV FGLDPERVRV VAPHVGGGFG
SKGEAHAHDV LAAMAARALP GRPVKFALTR QQMFCLVGYR TPTIQRVRLG ADRDGRLSAV
VHDSVEQTAR IKEFTENSAM CSRWMYAAPH RRTTHRIAPL DVPVNFWMRA PGEAPGMYAA
EAAMDELAQA CGVDPVELRV RNEPETDPQS GSPWSDRRLV RCLREGAERF GWHGRDPRPG
VRREGDWLVG TGVASASYPH LFNPGSVARV RYGRDGRYEV SIGAVDIGTG AWTALTQIAA
DALGLPASDI RLRIGDTAFP SASVAGGSSG TSSWGTAIVT AARAFRDRHG DSPAPGAEAE
GSGAEDTVDE SYSVYSFGAH FAEARVNADT GEVRVPRMYG LFSIGRVVNP RTARSQFLGG
MVMGLSMALH EESFRDPRYG HIANGDFAEY HVPTNADVGD LRAEWLDEED PRATPMGSRG
AGEIGIVGSA AAVANAVHHA TGIRVRDLPV TADKLLR
|
|---|
| |