| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1830 |
|---|
| Symbol | |
|---|
| ID | 9245680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2237443 |
|---|
| End bp | 2238237 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_003679764 |
|---|
| Protein GI | 297560790 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.135773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.345416 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACG GCGACTCCGG CGGCACCGTG CGCAGCGTCG CGCGCGCCCT GGACCTGCTC
GACCTGTTCG ACGAGAGGAA CCAGCGCTAC TCCACACGGG AACTGGTGGA GCGCACCGGC
CTGGCCAAGA CCACGGTCCT GCGGCTGGTC GCGACCCTGG AGCAGCGCGG ACTGCTGTGG
ACGGCTCCCG ACGGCAAGGT CGGTGTCGGC CCCAGCCTGC TGCGCTGGTC GCGCCTGGCC
CACGCCGTCT GGCAGGTGCC CGAGGCCGTC CGGTCCGTCA TGCGCGAACT CGTCGCCGAC
ACCGCCGAGA CCGTCAACCT CTACGTCCGC GCCGACGCCA CCCGCGTGTG CGTGGCCAAG
GAGGAGGGCC CCCAACGGCT GCGCCACGTC GTCAACGTCG GCGACGAGAT GGTCCTGTGG
GGCGGGGGCG CCAGCAAGGT GCTGCTCATC GGCGCGGGGG AGTCCCTGCT GCTGCGCGTG
GCCGCCGCAT CCCCCCACGG CCCCGGGCAC GTCAGCCGCC TGCGCGAGGA GGTGGAACTG
GCCCGCACAC GCGGCTTCGC CGTCAGCCAC GGCGAGCGCG AGCGGGGCGC CTCCGGCGTG
GCCGCGCCCG TCTACGGCCC CGCCGGCGGG GCGCCGGTCG CCGCGCTGGC CGTGGGCGGA
CCCACCGCCC GCTTCACCGA CGCCGCCGTG GAGGGCTTCA CCACGGCGGT GGTCGACGCC
GCCCGCCGCA TCACCGACAT CGGGCTCGAC CCCTCGGGAG GGACCGTGGG ACCCGGAACA
CAGGAGAGAC GTTGA
|
|---|
| Protein sequence | MPDGDSGGTV RSVARALDLL DLFDERNQRY STRELVERTG LAKTTVLRLV ATLEQRGLLW
TAPDGKVGVG PSLLRWSRLA HAVWQVPEAV RSVMRELVAD TAETVNLYVR ADATRVCVAK
EEGPQRLRHV VNVGDEMVLW GGGASKVLLI GAGESLLLRV AAASPHGPGH VSRLREEVEL
ARTRGFAVSH GERERGASGV AAPVYGPAGG APVAALAVGG PTARFTDAAV EGFTTAVVDA
ARRITDIGLD PSGGTVGPGT QERR
|
|---|
| |