Gene Ndas_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1825 
Symbol 
ID9245675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2231790 
End bp2233391 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content72% 
IMG OID 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_003679759 
Protein GI297560785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.915648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.529366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACAA TCGACCTCGT GGTCATCGCG GTGTACCTGC TGGGATCGGC CTGGCTCGGC 
CTCAGGCTCT CCGGCCGACA GCGCGATATC AAGGACTACT TCATCGGCAA CCGGCAGCTG
CCCTGGTGGG CGGTGTGCCT GTCGGTGGTG GCCACCGAGA CCAGCGCCCT GACCGTGATC
AGCATCCCCG GCGTGGCCTA CCTGGGCAAC GTCACCTTCC TCCAGGTGGC GGTCGGCTAC
CTGATCGGGC GGGTGGTCGT GGCCTTCGTG CTGCTGCCCC GCTACTACCG GGGCGAGATG
ACCACGGCCT ACGCCTACCT CGGCATCCGC TTCGGCCGGG GCATGCAGGG CACGGCCTCG
GTCGCGTTCC TGTTCACGCG GCTGCTCGCG GACGGGGTGC GGCTGTTCGC GGCGGCCATC
CCCGTCAAGA TCATCCTGGG CTCCTACGGG GTGGACCTGT CCTACTTCGC GATCATCGCC
CTGCTGGGCG CGGTCACGGT CCTGTACACC TTCGTCGGCG GCATCCGGGC CGTGGTCTGG
GTGGACGTCC TCCAGATGGC GGTGTACGCG GTCGGCGGCG TCGCCGCCCT GGCGGTCATC
GCGGGCAGCC TCGACGCGGA CTTCCTGACG GTGGCCGCCG ACGCGGGCAA GACCCAGTTC
CTCGACTTCA CCTCGAACCC GGTCTCGGCC CCCTACGCGA CGGTCACCGC GGTCCTGGGC
GGCGCCCTGC TCTCCACCGC CTCCCACGGC GCCGACCAGA TCATCGTGCA GCGGCTGCTG
GGCTGCCGCA GCCTGCGCGA CGCCCAGAAG GCGGTGATCG GCAGCGCCGT CGTGGTGTTC
TTCCAGTTCG CCCTGTTCCT GGCCGTGGGC CTGGCGCTGT ACGCCTACTA CGAGGGCGCC
TCGGTGGAGG AGCTGGGCCT GGCCAACTCC GACGAGCTCT TCCCGACGTT CATCGTGGAG
GGGCTGCCGG CCGGCCTGTC GGGCCTGCTG CTGGCGGGGA TCCTGGCCGC GGCGATGAGC
ACCCTGTCGT CCTCGCTGTC GGCGCTGTCC TCCTCCACCA TGGCCGACCT GTACGAGCGG
TTCAGCAGGC GCACGCTCAC CGACGCCCAG GGCCTGCGGC TGGGCAGGCT GTTCACCCTG
GGCTGGGGGC TGGTCTTCAT CGGGGCGGCG GCGATGTTCA CCGGCACCGA CAACCCGGTC
GTGGAGCTGG GCCTGTCCGT GGCCAGCCTG ACCTACGGCG GCCTGCTGGG CGCGTTCTTC
CTGGGGCTGT GGGTGCGCCG GGCCCGCCAG CTCGACGCGA TCGTCTCCTT CGCGGTCGCG
GTGGCCACCA TGGTCTGGCT GTTCCTCTTC CAGCCCGACC TGGTCGGCTT CACCTGGTAC
ACCGCCATCG GCACGACCAT CGTGCTGGGC CTGGGCTACC TGCTGTCGCT GCGCCACCGC
GACGCCGCGC CCCGGCCGGA GGAGATGCCG GGGGAGCCCT CCGACACCGG AACCGGGGAG
CCCTCCGACA CCGGAACCGG GGAGGGCTCC GGCGCCGCGA CCGGCCGGGC GCCCCGCGCG
GAGGGCGAGC CCACCCCGGC GGACGAGGGG GAGCGGCCCT GA
 
Protein sequence
MQTIDLVVIA VYLLGSAWLG LRLSGRQRDI KDYFIGNRQL PWWAVCLSVV ATETSALTVI 
SIPGVAYLGN VTFLQVAVGY LIGRVVVAFV LLPRYYRGEM TTAYAYLGIR FGRGMQGTAS
VAFLFTRLLA DGVRLFAAAI PVKIILGSYG VDLSYFAIIA LLGAVTVLYT FVGGIRAVVW
VDVLQMAVYA VGGVAALAVI AGSLDADFLT VAADAGKTQF LDFTSNPVSA PYATVTAVLG
GALLSTASHG ADQIIVQRLL GCRSLRDAQK AVIGSAVVVF FQFALFLAVG LALYAYYEGA
SVEELGLANS DELFPTFIVE GLPAGLSGLL LAGILAAAMS TLSSSLSALS SSTMADLYER
FSRRTLTDAQ GLRLGRLFTL GWGLVFIGAA AMFTGTDNPV VELGLSVASL TYGGLLGAFF
LGLWVRRARQ LDAIVSFAVA VATMVWLFLF QPDLVGFTWY TAIGTTIVLG LGYLLSLRHR
DAAPRPEEMP GEPSDTGTGE PSDTGTGEGS GAATGRAPRA EGEPTPADEG ERP