Gene Ndas_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1816 
Symbol 
ID9245666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp2221915 
End bp2222601 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003679750 
Protein GI297560776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.485663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG ATTTCGGCGT CACCGACCTG TCCGGCACGT TCAGCGTCAT GGACGTGGTC 
CTGTCCCTGA CCCTGGCGTT CGTCACCAGC CTCGTGGTGG CCTGGACCTA CCGCGCCACC 
CACCGCAACA TCAGCTACTC GCAGAGCTAC GTCCACACGC TGATCATCCT GGGCATGCTC 
ATCGCCCTGA TCATGCTGGT GGTGGGCTCC AACATCGCCC GCGCCTTCGC CCTGGTCGGC 
GCGCTGTCGG TGGTGCGCTT CCGCAACGCC ATCAAGGAGA CCCGCGACGT CGGGTTCATC 
TTCCTGGTGA TGGGCGTGGG CATGGCCTGC GGCACGCGCT TCTACACCCT GGCGGTCATC 
GCCACCGTGG TCATCTGCGC GGTCGTGCTG CTCATGCACC GCTTCAACTG GTTCGCCCTC 
AACGTGCAGC GCCAGGTGGT CAAGGTCCAG GTCCCCGCGG ACGGCGACGA CTACGGACCC 
GTGATCGACG ACGTGCTCAT CCGCTTCACC GACGAGTACG AACTGATCAG CACCGAGACC 
GTGCGCGGCG GTTCCCTGCT GGAGACGGCC TACACCGCAC GGCTGAAGAA GGGCGTCAAG 
CCCGGCGACG TCGTCCAGCG CCTGCGGGAG ATCAACGCGG GGCAGAAGGC GACCGTCCTG 
ACCGGCTACG ACCAGACGGA CCTGTGA
 
Protein sequence
MNLDFGVTDL SGTFSVMDVV LSLTLAFVTS LVVAWTYRAT HRNISYSQSY VHTLIILGML 
IALIMLVVGS NIARAFALVG ALSVVRFRNA IKETRDVGFI FLVMGVGMAC GTRFYTLAVI 
ATVVICAVVL LMHRFNWFAL NVQRQVVKVQ VPADGDDYGP VIDDVLIRFT DEYELISTET 
VRGGSLLETA YTARLKKGVK PGDVVQRLRE INAGQKATVL TGYDQTDL