Gene Ndas_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1813 
Symbol 
ID9245663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2218690 
End bp2219688 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content69% 
IMG OID 
ProductIntegrase catalytic region 
Protein accessionYP_003679747 
Protein GI297560773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0764832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACA CTACCCACGC CAACGCCACA CTCACACCCG CAGGGCGCCT GGCGTTGGCC 
CGCTGCGTGG TCGAAGACGA CTGGCCGCTC AGGCGTGCCG CCGAACGCTT CCAGACCAGT
ACCACCACCG CCAAACGCTG GGCCGACCGC TACCGCACCC AAGGCCAGGC CGGGATGGAC
GACGCCTCCA GTCGCCCGCA CCGCTCACCC CAGCGCACCC CCGCCCGCCG CGAACGCCGC
GTGATCAAAC TCCGCTGCAC CCGCCGATGG GGCCCGGCCC GCATCGGCGG CCACCTGGGC
ATGCATCCCT CGACCGTGCA CCGGATCCTG ACCCGCTACC GCATGCCCCG ACTGTCCCAC
CTGGACCGGG CCACTCACCG GGTAGTACGC CGCTACGAGC GCGCTCGACC GGGCGAGCTC
GTGCATGTGG ACATCAAAAA GCTCGGCAAC ATCCCCGCCG GGGGCGGACA CCGTACCCAG
GGACGCGCTC AAGGCCGCCG CAATCGCACC ACCACCGCGC ACGCCCCGCG CAACAACCAC
GGCAACCCCA AGCTGGGCTA CGGCTACCTG CACACCGCCA TCGACGACTA CTCCCGCCTG
GCCTACACCG AGATCCTGGC CGATGAGAAA AAGGAGACCG CCACCGGGTT CTGGGAGCGA
GCGCACGCCT ACTTCGTCTC AGCGGGGGTC GTGGTGGAGC GGGTGCTAAC CGACAACGGG
GCCTGCTATA CGTCCCACCT GTGGCGCGGC CTGCTCTATG GCCAGGGCAT CAAGCACAAA
CGCACCCGCC CCTACCGGCC CCAGACCAAC GGCAAGGTGG AGCGCTTCCA TCGCACCCTG
GCCGACGAAT GGGCCTACGC CCGCCCCTAC CAATCCGAGA GCGAAAGGCG GGAGGCGTTC
CCCGGGTGGT TGCATCACTA CAATCACCAC CGGTTCCACA CCGCGATCAG CGGCCCTCCC
GCCTCCCGCG TTCCTAACCT CTCAGGTCAG TACAGCTAG
 
Protein sequence
MPHTTHANAT LTPAGRLALA RCVVEDDWPL RRAAERFQTS TTTAKRWADR YRTQGQAGMD 
DASSRPHRSP QRTPARRERR VIKLRCTRRW GPARIGGHLG MHPSTVHRIL TRYRMPRLSH
LDRATHRVVR RYERARPGEL VHVDIKKLGN IPAGGGHRTQ GRAQGRRNRT TTAHAPRNNH
GNPKLGYGYL HTAIDDYSRL AYTEILADEK KETATGFWER AHAYFVSAGV VVERVLTDNG
ACYTSHLWRG LLYGQGIKHK RTRPYRPQTN GKVERFHRTL ADEWAYARPY QSESERREAF
PGWLHHYNHH RFHTAISGPP ASRVPNLSGQ YS